Tag | Content |
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EnhancerAtlas ID | HS176-03795 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr1:223935350-223936740 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
E2F6 | MA0471.1 | chr1:223936435-223936446 | CTTTCCCGCCC | - | 6.32 | GATA2 | MA0036.3 | chr1:223936005-223936016 | AGAGATAAGAA | - | 6.32 | Gata1 | MA0035.3 | chr1:223936005-223936016 | AGAGATAAGAA | - | 6.32 | RORA(var.2) | MA0072.1 | chr1:223936034-223936048 | AAAATCTAGGTCAG | + | 6.14 | SREBF2 | MA0596.1 | chr1:223935650-223935660 | ATGGGGTGAT | + | 6.02 | Zfx | MA0146.2 | chr1:223936617-223936631 | CAGGCCTCGGCCGC | - | 7.95 |
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| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_00224 | chr1:223934158-223937983 | Adipose_Nuclei | SE_01908 | chr1:223935156-223937517 | Aorta | SE_02306 | chr1:223935517-223937238 | Astrocytes | SE_03438 | chr1:223935748-223936798 | Brain_Angular_Gyrus | SE_04026 | chr1:223935516-223937349 | Brain_Anterior_Caudate | SE_05036 | chr1:223934795-223935890 | Brain_Cingulate_Gyrus | SE_05036 | chr1:223935985-223937127 | Brain_Cingulate_Gyrus | SE_05972 | chr1:223934663-223937571 | Brain_Hippocampus_Middle | SE_07159 | chr1:223935466-223937127 | Brain_Hippocampus_Middle_150 | SE_07996 | chr1:223935109-223937042 | Brain_Inferior_Temporal_Lobe | SE_23408 | chr1:223935446-223936989 | Colon_Crypt_1 | SE_24051 | chr1:223935677-223936100 | Colon_Crypt_2 | SE_24051 | chr1:223936159-223937066 | Colon_Crypt_2 | SE_25230 | chr1:223936038-223937178 | Colon_Crypt_3 | SE_26209 | chr1:223934955-223937096 | Duodenum_Smooth_Muscle | SE_26925 | chr1:223935278-223937175 | Esophagus | SE_31491 | chr1:223935283-223937172 | Gastric | SE_33950 | chr1:223935223-223936500 | HCC1954 | SE_34545 | chr1:223936173-223937185 | HCT-116 | SE_37129 | chr1:223934990-223937353 | HSMMtube | SE_38254 | chr1:223934520-223937640 | HUVEC | SE_41495 | chr1:223935110-223937269 | Left_Ventricle | SE_42269 | chr1:223934542-223937274 | Lung | SE_45872 | chr1:223935399-223937657 | Osteoblasts | SE_49408 | chr1:223935446-223937062 | Right_Atrium | SE_50365 | chr1:223934678-223937079 | Sigmoid_Colon | SE_53249 | chr1:223935441-223937088 | Small_Intestine | SE_65644 | chr1:223934516-223937226 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I223746 | chr1 | 223934513 | 223937570 |
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Enhancer Sequence | AGTTCATAAT AACTCATGGA AAGGACCAGA CGTCATTGTT TTCATCTTTG GCAGGTCCAG 60 ACTTTAGGCA GGTGAGGGAA CTTCAGAGAA TAGCTTCCTC CTGTGCTTTG GGGGAGAGTG 120 GATCGAGAGA CAGAAGGAAA GGGGAGGTCA GAGAGATCTT GAGGCTTCTT CAGTTTAGCA 180 TTTCAAAGTG CCATCTCTTA GAGGTATTGG TTTCTGAGCA CCCCAGTGTC TACCATTATT 240 GCTCATCACC TGGAAGCCAA GGGTTGCTAG GCAAAAGTCA AGCTGTCTGG GGTGTAATGG 300 ATGGGGTGAT GGTGCCTCCA GCCCTTCTGT CTTCAGTCCA CTTCCCACTC TTAGCCTGCT 360 CTGAATCACC CCCACCCCTC TGACCACAGG TTCCCTGGGA GCCCCTGCCA CCTGCTGCCC 420 CTGCCACCTT CCCCTCCATC TGCAGTGCTG TGCAGCCTTC CCCTGCACTC TTGCAGAGCT 480 AATAGGCCCG TGGGAGACTT CGGAAGGAAG AGGAGGAAAG ATTTCCTCAT AATAGCCTTG 540 CTGGCAACGC TCACCAGGGG ATGGGAGGTG GGCACTGTGC CCAGGAGCCT TGGAGCAAAG 600 GCTGTGCCCA ACCTCTGAGC CCTGTCCCAT CCAGGTTCTG GTCTCTGCGG GGGACAGAGA 660 TAAGAAGCCC TGGCTTTTGG AGCCAAAATC TAGGTCAGAC TCCCTAGGCA GGAATTCTCA 720 AAGTTTATCA GCAGAACACG TTGAGGCAGA AGACCCTTTC TGCTCCAGCC CTTCTTCCCA 780 GGCTCAACCT TCATCAGAAT AGATAGGGGA AAGGAGAGGC TGTGAGGCGT TCTTAAAACA 840 GAAGCAAATT CTGACTCAGA CCGGAATAAA CAACCGTCCT AGTATAAACC CTACAGCTGG 900 GCTGGGCCAG ACCACGGAGC ATGGGCTGGT GGTGGGGCGA GGGTGTGCTC AGTGTCCCTG 960 GGCCACTCAA GGCTGTCTGG GTATCAGCCC TGCGCCATCG AGGACCCCCT CCGGCCCTCT 1020 CTCGGCCGTG CGCCCTTTCC CTGCGCCATC GAGGACCCCC TCCAGCCCTC TCTCGGCCGT 1080 GCGCCCTTTC CCGCCCTTCC CAGCCTGCAG AAATCCGTGG ATGCGCTATT CACACGGGAA 1140 TGCCTGTGCT CGTTCCGCGA GAGGGTTGCA TTCCGCCTTT TCTCTGGTAT TCTCGGCGTT 1200 CAAGCATTTG AACGGGGTAG GAAAGGTTCT CCAAGTGCAA GAAAGCGCAG CCCTGAGCCT 1260 CCCACCCCAG GCCTCGGCCG CTGCGCTAGT GCGTCCGGCG GTCCCGCCCG GCAGTAGGAC 1320 AGAGGGAGCG AGGGAGTCCG GGAGGAAGGG AGAGCGGGTG CGGCCAGTCT GACGGTTGCT 1380 GTGTTTGCAG 1390
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