Tag | Content |
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EnhancerAtlas ID | HS176-00765 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr1:43409540-43410460 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
SPI1 | MA0080.4 | chr1:43410014-43410028 | AAAATGAGGAAGTC | + | 6.32 | SPIC | MA0687.1 | chr1:43410349-43410363 | CGAAAGAGGAAGAA | + | 6.08 | SPIC | MA0687.1 | chr1:43410014-43410028 | AAAATGAGGAAGTC | + | 6.68 |
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| Number of super-enhancer constituents: 47 | ID | Coordinate | Tissue/cell |
SE_01795 | chr1:43403674-43411142 | Aorta | SE_02447 | chr1:43405569-43410613 | Astrocytes | SE_05390 | chr1:43406422-43410832 | Brain_Cingulate_Gyrus | SE_06192 | chr1:43406287-43411226 | Brain_Hippocampus_Middle | SE_07319 | chr1:43406534-43411143 | Brain_Hippocampus_Middle_150 | SE_08269 | chr1:43406272-43411134 | Brain_Inferior_Temporal_Lobe | SE_10377 | chr1:43406726-43412417 | CD19_Primary | SE_11009 | chr1:43387831-43425728 | CD20 | SE_12470 | chr1:43408918-43409642 | CD3 | SE_13825 | chr1:43408814-43412632 | CD34_Primary_RO01536 | SE_14471 | chr1:43395753-43414527 | CD4_Memory_Primary_7pool | SE_19657 | chr1:43406292-43410967 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20345 | chr1:43407577-43412424 | CD56 | SE_20799 | chr1:43405756-43409955 | CD8_Memory_7pool | SE_20799 | chr1:43409957-43412980 | CD8_Memory_7pool | SE_22754 | chr1:43406075-43412634 | CD8_primiary | SE_23189 | chr1:43406366-43410995 | Colon_Crypt_1 | SE_23904 | chr1:43407223-43410890 | Colon_Crypt_2 | SE_25177 | chr1:43406652-43411022 | Colon_Crypt_3 | SE_26580 | chr1:43395721-43413249 | Esophagus | SE_29267 | chr1:43400819-43410293 | Fetal_Intestine_Large | SE_31882 | chr1:43406451-43411068 | Gastric | SE_33837 | chr1:43401475-43412846 | HCC1954 | SE_34353 | chr1:43395339-43412997 | HCT-116 | SE_35049 | chr1:43400682-43411164 | HeLa | SE_36013 | chr1:43405529-43411011 | HMEC | SE_37191 | chr1:43404622-43414101 | HSMMtube | SE_38794 | chr1:43405440-43410875 | HUVEC | SE_39883 | chr1:43405665-43410931 | K562 | SE_41038 | chr1:43405665-43414583 | Left_Ventricle | SE_41620 | chr1:43406373-43411014 | LNCaP | SE_42796 | chr1:43405575-43411121 | Lung | SE_49782 | chr1:43407568-43410944 | Right_Ventricle | SE_50202 | chr1:43406339-43411463 | Sigmoid_Colon | SE_54088 | chr1:43408884-43411067 | Spleen | SE_55340 | chr1:43407386-43410138 | Thymus | SE_55340 | chr1:43410345-43410828 | Thymus | SE_55821 | chr1:43405505-43410178 | u87 | SE_57045 | chr1:43406294-43410932 | VACO_400 | SE_57417 | chr1:43405825-43410963 | VACO_503 | SE_58561 | chr1:43388242-43430420 | Ly1 | SE_60624 | chr1:43388552-43428820 | DHL6 | SE_62392 | chr1:43388423-43425814 | Tonsil | SE_64094 | chr1:43405747-43410036 | HSMM | SE_64340 | chr1:43405657-43411071 | NHEK | SE_67781 | chr1:43405505-43410178 | u87 | SE_68708 | chr1:43406265-43410984 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I042929 | chr1 | 43395541 | 43414526 |
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Enhancer Sequence | CAGCAAAATG GCAACAGCTT CGTTTGTCAC ATTGGAGATG TGATCCCACC TTGCCCTACC 60 CTTCCTGCTG TTCACAGGGC AGGAAACTGA GCCCTGAGAG GGTGAGGCAA GTTCCAGATC 120 ACTCAGGAGC CTGCAGCAGA GCTCAGGGCT CCGGACTCCT TACCCAGTGC TCCTCACGGC 180 AATAATCCCC AAACCATAAG CCTCCCAAGG TTATATGGAC ATAGACGACA TGCTAGGCGG 240 GAATGCACTT TGGAAAAGTG CACAAGGTGA GTAAGAGTGT GGGGCTAAGG TGTTTCCAAT 300 GGGCAAAGGG ATGGGAGAGA AAAAGAGCAG TTTGCTTCTG TCCATTGGAA GCCGAGGACC 360 TAAGGCAGCA GGAAGGGCAG AGGCCAGCAG GTGAAGAGCC CTGCTTAGCC ACAGGTGACT 420 GAGAGGCCAG CAGGGTGTCA GCCCTGCTGA AGAAAAGTGC TCTTTTCAGC TATAAAAATG 480 AGGAAGTCAG GAAATGTGAC ATTAGGCAGG CCTTTAACTG ATTGTGGGAG AACAGGGCTG 540 CGGGAGGCAT GCCAAAGAAA CGACTGGCAT TCACTACGCA CACTATACCA AGCTGGGCCC 600 TGGAAGTGGG TGGAGCTGGC CATGGCCTGG CTGTGGGTCT CTGGGCCTTG GTTTCCACAG 660 AACCCAGAAG CAGCCTTTAC TTCAAGATCA TCACAGATAG CCCTGGGCAT AGCTGTTACC 720 AGGCATATTC CCAGTATGGT CTTTTCATTC TCTGAAAGCG TCAGTCAGGG CAACGACTGC 780 AAAAGCCAAG GCTCTCACAT CAGAGGCTGC GAAAGAGGAA GAAGGCTTCG GCCCAGGAGG 840 AGTGTGCAGC TCAGAGCCCC CTCTGTGTGT GCGCTGCATC CTTCCTTCCC ATTAGTCTGT 900 CTACCTGACC CCTTAGCCTG 920
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