| Tag | Content |
|---|
EnhancerAtlas ID | HS176-00472 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr1:27474680-27476430 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:27476050-27476071 | GGAGAGAAAGAGAAAGTGACT | - | 6.76 | | Nr2f6(var.2) | MA0728.1 | chr1:27475353-27475368 | GAGGTCATAAGGTCA | + | 7.63 | | RARA | MA0729.1 | chr1:27475353-27475371 | GAGGTCATAAGGTCAGCC | + | 6.94 | | SOX10 | MA0442.2 | chr1:27475554-27475565 | AAAACAAAGGA | + | 6.32 | | SPIC | MA0687.1 | chr1:27476093-27476107 | CAAAAGGGGAAGAA | + | 6.21 | | Sox3 | MA0514.1 | chr1:27475554-27475564 | AAAACAAAGG | - | 6.02 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_01262 | chr1:27475830-27476567 | Adrenal_Gland | | SE_04452 | chr1:27474703-27477513 | Brain_Anterior_Caudate | | SE_08182 | chr1:27474493-27477860 | Brain_Inferior_Temporal_Lobe | | SE_09350 | chr1:27475396-27477103 | CD14 | | SE_31553 | chr1:27474444-27477774 | Gastric | | SE_41510 | chr1:27474528-27477366 | Left_Ventricle | | SE_42029 | chr1:27475962-27476607 | LNCaP | | SE_42522 | chr1:27474662-27477262 | Lung | | SE_49041 | chr1:27475070-27477135 | Right_Atrium | | SE_52500 | chr1:27475103-27476618 | Small_Intestine | | SE_53642 | chr1:27475704-27476774 | Spleen |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 27475439 | 27475550 | | chr1 | 27475723 | 27476085 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I027148 | chr1 | 27474529 | 27477366 |
|
Enhancer Sequence | AGGACAAGTC CTCCATTTCA AAGATTTGCT GCTCCACAGA TAAGGGCTAT GAGAATGTCA 60
GTCCCCAGTG CAACTCTGGC CCTCATCCTC CTTCATGCAA ATACAGGTAT GTTCAAGTTG 120
TAGAAAAGAA CTTGGAGCTG AGCCAAAGCT GTCAAGGCTC CAGACCACCC AGACCCTTTA 180
GCCCTTCCTG CCTACAGGAG GAACAGGTGT CCCTCCTGAC AACAATCCAG GTTACCAATG 240
TGGATGTGTC TGGTCATTGA CTCTCCTCAA AGCCCCTTTA AATCTCTCAT CCCCCTTGAT 300
CCAACAAGAA CCCAGCATGT TGGCCTGGCA GGAGAGAGTT TGGCCTTGAG TGATTAGTCC 360
CAGGCATGCT AAGTGACCTC AGGCAGGTCA CAACCGAAGG CTCAATTTCC TTAGATGTAA 420
AATGATGAAC ACATCAATAC CACATGCTAT TCTAACCCAC AGGACCACTG AGAAGATCTA 480
AATTAAATAT TGTACACACA AGTGCTTTGG AAACAAATTT CAGTGCTAAT GAGAAGTACT 540
ATTAAACTCC TCCTGCCTTG TAGAGCTAAA CAAAGTTGTG CCACCTGCTC CCAACAGAGG 600
CTGCCTCTCA GGGGACTCTG CTGGGCCCTG AGGGTAACCA AAAGCAGCCT GTCACCTTTC 660
TGCTCAGAGG CGGGAGGTCA TAAGGTCAGC CACCCCTTGT GGCTAAAGGA GACCACCCTT 720
TACCTGGCAC TTCCCTGCCC AAGCAGGGAA GAAGCAAGCT CTGGTCTGAT GGCTGAGAGG 780
GCACCGGAAG AGAGATAGCA GGCAGGGTTG CTAGCAGAGA ACAAGGGATA GGCCTCCTGA 840
ATGCAGGATT CAGGTGCATC CAAGAAGACT CACAAAAACA AAGGACAGGT GCACAGCTGG 900
ACACAGAACA CCTACAGCTT TCTCAAGGCA GGGACAGGGC TCCCACCAAC GACATGTGCC 960
CAACTCCTAG AGGGAGTCCT ACAATTCCTG AGTGCAGGTG CAGTGAGCTG GGCGCTTCTC 1020
AGTGCAGGGC CATGTGCATC TGCTGCGGGA ATGCCAGAGG CAGGAGATGC AGCTGCACCC 1080
CTCTAGCAGG CTATGCCAAG ACTCGAACAG ACAATAAATA GCAATTTGAC ATCACTGAAG 1140
ATAACCTCTC TGAGCCATTT CCTCATCTGC AAAACAGAGA CAGCTTTTAT CTCATGTGAT 1200
TTGAGTAGGG ATTAAATAAG ATTGCTTTTA TAAAGTGCCT GACACTACTC TGTAGATACT 1260
AAGTGGCAAC TATTATTAAA ACACACACAC CCGTTCAACA CAGGAGATGT CACAGGGCAG 1320
GCAAGGCCTA ATGCCACTGT TATGGATAAA CAATAAGGGA AAAGGGTTTG GGAGAGAAAG 1380
AGAAAGTGAC TGCTGTGGGC TGGGAAGACC TCCCAAAAGG GGAAGAATCT GCACGGCCCT 1440
GAAAGTTACT ACAGTGAGCT GGGCACTCTA CCAGGCATTC CCACGTTCAG CCTCTACGTT 1500
GGTCTTAAGG ATGAGGCAAG TCAGGTTCAG AGAATGAGGT GCATGAACCT CAAGGTTCAT 1560
GGTCACACAG GTACTGAGAG GCAGCATCAG GAGCAGAACC CAGGGCTTCT GACTACGTCT 1620
TTCCTTTGTA CCAGGGCTGG ACGCCATGGG GCTGGCTTGG AAGGAGAGGA AAGGCAAACT 1680
TCGAGGGTGC TCAGCTGAAT GAAGTCTGGG CAATCTGACC AACTAAGCCC TCTAAGTGCC 1740
TTGGCACTCC 1750
|
