Tag | Content |
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EnhancerAtlas ID | HS175-02557 |
Organism | Homo sapiens |
Tissue/cell | SK-N-MC |
Coordinate | chr1:198645100-198647330 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA(var.2) | MA0072.1 | chr1:198647013-198647027 | CAAAACTAGGTCAT | + | 6.04 | RORA | MA0071.1 | chr1:198646024-198646034 | ATCAAGGTCA | + | 6.02 |
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| Number of super-enhancer constituents: 37 | ID | Coordinate | Tissue/cell |
SE_09213 | chr1:198635872-198655696 | CD14 | SE_10200 | chr1:198645212-198655760 | CD19_Primary | SE_10874 | chr1:198579403-198671825 | CD20 | SE_11822 | chr1:198641583-198659594 | CD3 | SE_12868 | chr1:198644808-198645704 | CD34_Primary_RO01480 | SE_13336 | chr1:198646032-198647150 | CD34_Primary_RO01536 | SE_14382 | chr1:198640936-198657701 | CD4_Memory_Primary_7pool | SE_15405 | chr1:198645022-198653101 | CD4_Memory_Primary_8pool | SE_15805 | chr1:198643633-198645531 | CD4_Naive_Primary_7pool | SE_15805 | chr1:198645559-198652877 | CD4_Naive_Primary_7pool | SE_16283 | chr1:198644729-198655705 | CD4_Naive_Primary_8pool | SE_16874 | chr1:198641765-198654513 | CD4p_CD225int_CD127p_Tmem | SE_17305 | chr1:198604496-198661531 | CD4p_CD25-_CD45RAp_Naive | SE_17776 | chr1:198639811-198661458 | CD4p_CD25-_CD45ROp_Memory | SE_18245 | chr1:198640214-198661625 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19200 | chr1:198644405-198653286 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19995 | chr1:198643678-198661190 | CD56 | SE_20746 | chr1:198641824-198645379 | CD8_Memory_7pool | SE_20746 | chr1:198646194-198653440 | CD8_Memory_7pool | SE_21460 | chr1:198645185-198654564 | CD8_Naive_7pool | SE_21924 | chr1:198643564-198657909 | CD8_Naive_8pool | SE_22285 | chr1:198604395-198665148 | CD8_primiary | SE_25576 | chr1:198643754-198654631 | DND41 | SE_31026 | chr1:198644521-198648451 | Fetal_Thymus | SE_39433 | chr1:198644242-198645519 | Jurkat | SE_39433 | chr1:198645558-198648110 | Jurkat | SE_46430 | chr1:198645462-198647113 | Osteoblasts | SE_49861 | chr1:198641770-198648291 | RPMI-8402 | SE_58290 | chr1:198564715-198671046 | Ly1 | SE_59080 | chr1:198588455-198654514 | Ly3 | SE_59608 | chr1:198585244-198671628 | Ly4 | SE_60444 | chr1:198588133-198656098 | DHL6 | SE_61004 | chr1:198588339-198656148 | HBL1 | SE_61429 | chr1:198565046-198658062 | Toledo | SE_62210 | chr1:198565497-198666528 | Tonsil | SE_66263 | chr1:198644242-198645519 | Jurkat | SE_66263 | chr1:198645558-198648110 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 198645544 | 198645800 | chr1 | 198646761 | 198646800 | chr1 | 198646800 | 198647109 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I198660 | chr1 | 198629438 | 198661503 |
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Enhancer Sequence | CTATCTGGAA TTAAAATGTT TGCATTAAGT TTAAAACTCA GTAAAATAAA TGTTTGAAAT 60 GAAAACCAGA CCAATAATGA ATAATTTTAC TTAGACCTAC TCTCCAAATG TGCTAAAAGA 120 CTTGTAAAAG TTGTTGTTGT TTTAATAACT AAGTCAAGCC AGTTTTATTT AATTCAATAC 180 ATGGAGTATT AATGCGCTGT ATGAATGCCG AAGGTAGTAT TGGACGCCAC AATCTTTAGG 240 AACCATGCTT CTGAGTTTTA AAATGGTGAC TAGTTTAGCA TAGATTCAAC ATAAGCATTA 300 GGTGTTCTTT TGACATTTGG GAATCAGCCA ATCAACAGGA GGAATAGTAA ATTGAATACG 360 AACTTGAAAG AGACCATGTC TTTTTTTCAT CCAACTGTGA AAAACTTTCT TTGTACAATT 420 GTTAAACTTA AGAAACAGAT GGTAGATCTG TATCAGTCAG TGAGGGGTTT CTGAAGTACT 480 TTTCTGGATG AATGCCAAGA AAATGGGTTT CTGAGACTTG CATGGCTCTG GATTTGTTCT 540 GAGCTGTTTA GTGAAGTGAG GGCTGGCATT CAGAACCCAG GGGAGGGGGA GTAGTCATTC 600 CCATTGCCTT GCATAGAGAT AGAATCACAG GTGACAGGTC ATTGGAAAAT CACTTCTTGA 660 GAGTGGGTAT CTTTATTTTG AGTTGGTATC TTTTTGAGAG TTGGCCACTC ATAAGCCTTG 720 CTTTTGATAA CATTTCTTTA AATTCCTCCA AGGAACAAGG GGAAGTGCAA AAGGAATACG 780 ATAAAGTGCA GCATTGAATG AGATAAGCAT ATTCAACTTA AGGGGCACAC TAAATACTGT 840 AATCTGGGAG CATAACTCAG ATTTCTTTTC TTCTTTGCTC AGTATAAGTT GCATGATCAT 900 AGAAGATTTA TGTAGAAGTC AGAAATCAAG GTCAAGAGGG TAGGCATATT TAGATTCTTA 960 CCCTATTCAT AATTAACAAT AAAATAAGAT TTTGTGTCCT GATTCAGAGA ATGGATGGCT 1020 CAGTCCTTAT AACCTCTTAA ATTAGTTTTA TCTATAACTG GATTTCTGAA TCTCTTTTGA 1080 AAATTACTAC CATTGATGGT CACTGAGTGA AAAAAGCAGA AGGATAGACT GGTGTTAACT 1140 GTAATGAACA TTTATCCAAC ATTACCCGTG GGCCTGCTAT CCATTTTAAA TTCTAAAAGC 1200 ACTTTACAGC TTGCTAATAC ATAGCCTCAT CTCCAACCTT GCATTCCTAA GTTCCACTCT 1260 GCATTCCACA AATGGGATTA ATCACCTACT GAAAGCTCTA TAATAATTCC TGTCACCTGG 1320 GGATAATGTT AAAACTTCTC AGTTTGTGAG AGAGGGCCTT CATTATCAGT GTCACATTTA 1380 TTTTCCAGAA AGATTTCTAG CACCCCTCTA CCTTACATCT TGCTTTTCAG CCAGGAAGAA 1440 CAACTTTTAC TTTCTGAAAT GTACTAGATT CTCAATGTTG GGCCACATTG CTATTTTTTT 1500 TTTTTCTAAA AGACTCATCA TCTTCCTTTC CTACCTAACT CAAACATATC CCTCTTAACT 1560 TAGACATTAC TTATTTTGGG GGAGTCTTCC ATGATTACCC TAAGAATAGG GTAAGCATTC 1620 TTCCTCCCTG CTTCCATAGA AAGTAGGAAA CTATTGCACT TACACATTGT AATGTGGCTA 1680 TAGTATGATC AAAATAATTA AATCTAAACA ATACTGTGTG GATTCAAATT TTTCTCAGCT 1740 ACTCACAAGC TGCTATCCAT TTTACCAAGC CTCCTGCATG TATTACTATG TCTAATCCTC 1800 ATATCAACTC ATATATAAAC TAGATTTTAT GATTATGGCT CTAAAAACAA GGAGACTAAA 1860 CCTCGGAAAT ATCATTTAAC CTGTACAAGA CCTTACTTGG CTGAGCTAGG ATTCAAAACT 1920 AGGTCATTCC GAGGAGAATA TAAAGTCCAG CTTTTTTTTT TCCACACAGG GATGTATATT 1980 TCCAGGTACA GTTTTACATT TTGTTCTTTA TTGTATGAAC ATAAATATAG ATACATATGA 2040 AAATTCGAAA GCACATGAAA GTGCCAAGAG GAAATGCAAT ACCATCTTAT GAAATGAGAA 2100 ATTACACATA TCTTACAGTG AGTTTCAAAA TTATATTGCT CAAAGTATTT TTACTGTGGA 2160 ACCATAGGCA CAAACTATAG CAAGAGTAAA TCCAAAAATG TTTATTGTTC TTCTATAAAC 2220 TAACTACTGT 2230
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