Tag | Content |
---|
EnhancerAtlas ID | HS175-00453 |
Organism | Homo sapiens |
Tissue/cell | SK-N-MC |
Coordinate | chr1:27984900-27986900 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr1:27985215-27985233 | GGAAGGAGGCAAGGAGGG | + | 7.52 | Klf1 | MA0493.1 | chr1:27986627-27986638 | TGGGTGTGGCC | - | 6.62 | MEF2A | MA0052.3 | chr1:27984937-27984949 | GCTATTTTTAGT | - | 6.18 | MEF2B | MA0660.1 | chr1:27984937-27984949 | GCTATTTTTAGT | - | 6.62 | MEF2C | MA0497.1 | chr1:27984936-27984951 | TGCTATTTTTAGTAC | - | 6.99 | Nr2f6(var.2) | MA0728.1 | chr1:27984985-27985000 | TGAACTCCTGACCTC | - | 6.22 | SNAI2 | MA0745.2 | chr1:27985144-27985154 | AACAGGTGCA | + | 6.02 | ZNF263 | MA0528.1 | chr1:27986240-27986261 | CAAGGAGGGTGAGAGGGAGGG | + | 6.09 |
|
| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_09188 | chr1:27984869-27988237 | CD14 | SE_10634 | chr1:27984903-27988562 | CD19_Primary | SE_11776 | chr1:27984395-27990384 | CD20 | SE_20299 | chr1:27984718-27990268 | CD56 | SE_25377 | chr1:27984923-27990773 | DND41 | SE_39434 | chr1:27985042-27986364 | Jurkat | SE_41048 | chr1:27984782-27987816 | Left_Ventricle | SE_42462 | chr1:27984924-27987820 | Lung | SE_49213 | chr1:27985000-27987630 | Right_Atrium | SE_62470 | chr1:27916580-27996594 | Tonsil | SE_66376 | chr1:27985042-27986364 | Jurkat |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 5 | Chromosome | Start | End |
chr1 | 27985480 | 27985709 | chr1 | 27985869 | 27985982 | chr1 | 27985087 | 27985400 | chr1 | 27985400 | 27986535 | chr1 | 27986111 | 27986384 |
|
Enhancer Sequence | GACTACAGGT GCATGCCACC ATGCTCGGCT AATTTTTGCT ATTTTTAGTA CAGATGGGGT 60 TTTGCCATGT TGGCCAGGCT GGTCTTGAAC TCCTGACCTC AGGTGATCCG CCCACTTTGG 120 CTTCCCAAAA TGCTGGGATT ACAGGCATGA GCCACCACAC CTGGCCCTAA ACTGAGATTT 180 TTTTTTTTTG AAGGATAAAT ACAAGTTAAA TAGGGAAGGG AAGAGTGTTT AGGTCTGAGA 240 GAAAAACAGG TGCAAAGGCT CAGAGGCGAG AGAGACATGT ATTTTCAAGC AGCTGAAAGT 300 TCAACGTGGG CAGAGGGAAG GAGGCAAGGA GGGGAGTGGC TGCGCTGAGT GAGGTCAGCA 360 GTCACTCACC AGTCCTCAGC TGAACTGAGA CCCACCTTAG GGGTCAGGAT CCATCCTCTT 420 CCATGATGAT CAGGGATGAG GAGTTAGCCA GGTAAAAGGT GTGAGGGGAT GGCTCAGGGA 480 AGAAGTGATC CCAGCAGAGG TTTGTGTCAC TGGGAGAGAG GAAAGACAGC TGAAAGTTGA 540 GTCTGGCTAT AGCCTGCCTG GGGGCTTGGC TGAGAAGAGA GACCTTGGTA TTGTGGCCTG 600 TGGGTCTTGC CAAGTGGCCT GAGGGCCATA CGGAGCCTCT GAATGGTTTT GTGCAGGGGA 660 GTGACTCAAC CTTGGTAGGA ACATGCAGGA AGGTTGTCCT GGGATGCCCT TTAAGGTCTC 720 AGCAGACTGA AACCTCAAAG AGCCTCTGGG GAGCCCAGCC ATCTTAGGCA CAACCTCATT 780 CGAGCCATCA GGGAGGATGA GAAAACTCAC TTGTCAGAGG AACCTTAGAG AAGTCAAGAG 840 ACAAGGCTGG AGGGCCCTGA GCTGGGGGGT GGGGAGCATG GGGAAAGAAG AGGGTGAGGG 900 CTCAGAAAGG CAAGAGCCCC GACACCAGGA GGCGGTGCCT GCTCTTAGCT TGCCACGGAC 960 TCCATGATTC AAGAAGGCCT GGCCCCCAGG ACCCTGGGAC TAGAAAGGCA ATTGACTCAT 1020 CCTAGGATGG GGGAAGCCTG GCCCCGGAGG TTAAGTGAAA TTGCTCTAAG ACACAGAGCA 1080 CATCAGCGGC AGGATCAGGA AGAAACTAGT AACCCTGGAG CACCTAGCAC CAGCACCCCT 1140 AGTGCAGGGT ACTTCATACC TCGCATCATC TAACGCAGGT GTCGCTTCAT TTTACAGATA 1200 AGCGGACTAA CGTCCACAAG TCATGGACTC CTGTTCTGGG TCACACAGAG TTAGGGCTAA 1260 GAAACCAGGT CTGCAGGCGC CTAGTTTCCC GCAGTTCTTC TGGGTCTGAG TTTGGGGTGG 1320 TGGGGAAGAG GCGAGCGTGT CAAGGAGGGT GAGAGGGAGG GTGGGGCTGT GTTTCTGGGA 1380 CTTTCCTCGC TGAGGTCAGA GGCACCGAAA TAGACGCGCT GCAGCGAGCG CCCGGAGGCC 1440 CGGTCACACC CTGTGCCCGG CCCGCCGCGG GGAGCGGTCC AGCCGCAGCG CACGAGCCCT 1500 CCGCCGTCCC ACTGCCCCCC GGAACCGCGC GAGCCTCGCA AACCGCTCGG CGCCCAGTCT 1560 CCACCTCGCC GGCTTCATGA ACGTGCCCCG GGAGACCCCG ACGCCCTGAA GCCGGCGCGG 1620 CCGCCCCACC GCCCCACCGC CCCACCGCCC CACCGCCGTC TGCGCGAACG CCGGGCCTCC 1680 CCCTCCGCCC ATCGCTGCCA CCATCTCTAC TCCGACGGCT GCGGCGGTGG GTGTGGCCAC 1740 CGCGCTTGCC AATCAGGAAG TGAGGGCCGG CTCCGGACGC GCCCCGCTGT TACGTCACTC 1800 CGACGGCCCC GGATGCCCCG CCCAGTGGCC TTGCCTGGGA AAGGCGACTG GGGCACCGGT 1860 GGGTGCGGAC CCTCAAAGGG TGAAAATAAT TCCCGTGTGA ATTGCGCGCA TTATAACTGC 1920 TCTAAGAAAT GCAGCCAGGG CATTTTAAAA TGTATTTTTT CAATCACTCC TCTTCCAGCC 1980 ATTTATCCGT CCGTCTGTAT 2000
|