Tag | Content |
---|
EnhancerAtlas ID | HS173-00380 |
Organism | Homo sapiens |
Tissue/cell | SH-SY5Y |
Coordinate | chr1:56996480-56998870 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXP1 | MA0481.2 | chr1:56998529-56998541 | AAGTAAACAGAC | + | 6.52 | FOXP2 | MA0593.1 | chr1:56998529-56998540 | AAGTAAACAGA | + | 6.32 | Gata1 | MA0035.3 | chr1:56996717-56996728 | TCCTTATCTCT | + | 6.02 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_07270 | chr1:56995411-56996972 | Brain_Hippocampus_Middle_150 | SE_28250 | chr1:56997761-56998865 | Fetal_Intestine | SE_28999 | chr1:56997779-56999080 | Fetal_Intestine_Large | SE_32719 | chr1:56997253-56998648 | H1 | SE_40732 | chr1:56994573-57004538 | Left_Ventricle | SE_42379 | chr1:56995666-56996775 | Lung | SE_42379 | chr1:56997630-56998723 | Lung |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I056529 | chr1 | 56995412 | 56996972 | GH01I056532 | chr1 | 56998101 | 57003835 |
|
Enhancer Sequence | ACTCCCTTAT ATTCCATTCA TTCAGCCAAA CAGGTCTGCT CTACATTCCC TGAAAACACT 60 TCATTGTTTT GAAGTCTCTA AAATGGCTGA AGCCACTCCT TCTGCCTAGG TCAGGTTCTC 120 TGACGAAAAT CCTACTTATG CCTTAAAGTA GAGCTCAAGT GCCAACTAGT GTTCTGGGTT 180 AGAGTTTGGC TCTTTGACTT ATGAGTCTTG TACAACTGAG CTCTCTAAGT CTCAGTTTCC 240 TTATCTCTAA AAATGAAGAT GATGACAGTA TCAAAAGCAG GGTTGTGGTG AAAATTATAT 300 GAGACGAGTG CTCAGTGAAT AATGATGATG ATGAAGCCTT GGCATAAGCC TTAGCCTTAA 360 GTGCTCTTCC TCTGAACTCC CATAGCACTT TATTTAGACC TCAGACAATC TGCAGCATCT 420 GATATGTTTC GTCCTTGAAG CTCTCCCCTC CCTAGCAGCC ACCACCATGC ACTGCCCTGA 480 CTCTCCTCTT ATTCTCAGAC TAATTATTTC CTTTCCTTGA GGGTCTAATC CTATAGTCAG 540 ACTTGTACTT GTCTTGAATT CCCTTTAAAC CATAAGATCC AAAGGCAAGA TCTGTATTTT 600 ACACATCAGC TTATAGGCCA AGGTGCCTAC CACAAAGCCT GCTTGCTATA AGGGAGGTAT 660 CACCCGGCAC CTACCTACAC ACAGCAGGTG ATCACCATCT CTACAAACCA TTGATGCACA 720 CTGTCAATCT TGGGCAGTCA TCTGCCCAGT GGTCTAGATG TTTTATCTTC CTCCATACAT 780 TTAACTCTCC AAGCCCAGTA ACTAAAAGCT TTTATAGCTA ACTAAATAAA GAGCACTCTA 840 CATAGCACCG ACCAGAGTGG GCCTTCATTA GCATCTGTTA AAGCACTTAG GCTTGAAAGC 900 CAAACAGATC TAGGTTTTAA TTCGTGTTCC CCCATTCACT AAGCAGAGTA ACCTCGGGCT 960 AGTCACTTCA ACCTTATAAG CCTCAGTGTC CTCCCTCATT TGTCAAATGT GGTAAATAAT 1020 AGCAACCTCA CATAGCTGTT GAAGAGGATT TAAGATAAGA CATGAGTTTC TGGTCCATTA 1080 AATAGCTCAT AAATGTTATC TGACTCTCCA CCCCATCCCC AACACACACT GCCCCTCACA 1140 GAAAGTATTT CTCGGCCTCC TAAGCATTAT GACTTCAAAT GGAGCATATC ATCACCTCCG 1200 TATTGATACG TTTTTCAAAT AGTCATGAAT CCCTAAGAGC TGTACCTAAC TAAGGAAGAA 1260 TTGCTGCTGT TCTCACTTCT TCCAGGACAT GAGAGTGAGT GTGGGTGGTG GAGAAAGGGA 1320 ACAGATGAAA ATTTAGTGCA CTCTCCATGC CTGTGTTGTT AAATCACAAA TAGATGCCCC 1380 CTCCCACTGT TCCCCCAGGG ATAAGAAGGT CTCAGAAGAA CTCTGTAGCC ATCTGATCAG 1440 GGGACAACAC AGTTGAAGGA TTAATGTGGC CTCTCTCTGT TGGTGGTCTT GGTAATTGCA 1500 CAGATGTAGT GGATTGTAAA CTGGGGGACT GGGTCTCCCA CTAATGCACC ACTGGGCCAG 1560 CACAACTGCA CATTTTTCAG AGTTGAAAAC TCGACTAGCC TTTAATGAGG AGGCAATGTT 1620 GAGGAACCTT GTTTTCTTGG CAGGGCTCTT GTAGATAAAG GGAGATGGAG GGGTGGGGAG 1680 GAACTAATGA AGTCCAGATG TGGGCAAAGT GAAGCATGAT ACTGAATAAA CAAGTCTTGC 1740 AGGTACTAAG CTCTTCTTCT TGTCTCTCCA GCAAGAAATT TGCATGTGGT ACAGAGTGTG 1800 TTCCCATGTG CCTCCTGGAG CATAGTTGAG ATTTTAAGGA AGAAAACAGG ACATTTTCCC 1860 CTGCTCTGTG AATCCTCTGA TATCTTTTGA CCTAATGCTT TTGATTTTCT GCCCCCAGTT 1920 TATGGCCTCT TCTGTGATTT TTCACAAACA TATATTGAGC ACCAAGGTCT ATGTCTCACA 1980 CTAGCAATAC CAAATCAAAT CAGATCTGTC TCTCCCCTGT GCAGCTAACA GGGTAGCCAA 2040 GAAATATACA AGTAAACAGA CATGACAATC AGCACAGTGA CTGCAGCCAC AGAGGTGGGC 2100 CCAGGGTTCT CTGTGACCTT TGGAAGGTGG GGGAGGAGAC AGCTACGGAA TGCTTCCTGG 2160 AGAAATGTCC GCCTGGTGTT TAAGTACCTA CCATGTGCCC AGAGGAAAAG ACCTGGCCCC 2220 GTCTTCCAGC AACCTATTAT GTAGCTTTTT TTTTTTTTCT TTTTGATACG TGGTCTCATC 2280 CTGTCGCCCA GGCTGGAGTG CAGTGGCATG ATCTTGGCTC ACTGCAATAT CCACCCCCTG 2340 GATTCAAGCG ATTCTCCTGC CTCAGTCTCC CAAGTAGCTG GAATTACAGG 2390
|