EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS172-01083

Organism

Homo sapiens

Tissue/cell

SGBS_adipocyte

Coordinate

chr1:226894190-226895170

Target genes

Number: 5
Name	Ensembl ID

PARP1	ENSG00000143799
AL359704.2	ENSG00000244110
RP11	ENSG00000229965
ITPKB	ENSG00000143772
PSEN2	ENSG00000143801

dbSUPER

Number of super-enhancer constituents: 19
ID	Coordinate	Tissue/cell

SE_03869	chr1:226893845-226894924	Brain_Anterior_Caudate
SE_04801	chr1:226893080-226894986	Brain_Cingulate_Gyrus
SE_04801	chr1:226895006-226903563	Brain_Cingulate_Gyrus
SE_05781	chr1:226892963-226895310	Brain_Hippocampus_Middle
SE_06710	chr1:226893703-226894880	Brain_Hippocampus_Middle_150
SE_07746	chr1:226893515-226894937	Brain_Inferior_Temporal_Lobe
SE_10887	chr1:226895020-226908737	CD20
SE_17296	chr1:226887872-226908646	CD4p_CD25-_CD45RAp_Naive
SE_18263	chr1:226887975-226903974	CD4p_CD25-_Il17-_PMAstim_Th
SE_22315	chr1:226893296-226894732	CD8_primiary
SE_25774	chr1:226893190-226894857	Duodenum_Smooth_Muscle
SE_25774	chr1:226895022-226903030	Duodenum_Smooth_Muscle
SE_40782	chr1:226893954-226894899	Left_Ventricle
SE_54498	chr1:226888025-226894921	Stomach_Smooth_Muscle
SE_58303	chr1:226819953-226937809	Ly1
SE_59629	chr1:226819233-226928465	Ly4
SE_60416	chr1:226819368-226929640	DHL6
SE_61009	chr1:226812849-226900772	HBL1
SE_62233	chr1:226813614-226929647	Tonsil

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I226705

chr1

226892964

226895310

Enhancer Sequence

TCAATGTCCT GAAAGGGCAA CATGGCCTGT GAAATGTGCC TCTCTCTGGA AAAAGGGTGT 60
GTGGCTTTCT ACCACTTTCC AAAATGGCAT AAGACCCAAA AGGGGTTAAA AAACACTGAT 120
TTGGTCCAGC TCTTGGATTT CACAGATAAG ACCCAGAAAA CTCAGTTGAG TGCTCCAGGT 180
GACAGGGCAA ATTATATGTC ACCTTCTAAA GCTGGTTGGG GCCTGTGGGA GGAGGAGGAG 240
GATACCACTC GAGCTAACAG GTCTTTTCCA TTTCTAATTA CAAGGATTCC ATGAAGTTTC 300
CAGCCGCCAG TCTGTCTGGC TTTCTGGGCC TGGGTGTGTC AGTCGCCACT CTGTTGCCGA 360
GGTGCACAGA TGGCCAGGGG ACTGGGGTGG CTGGATATGG CCAGCAGCCA GCTGGCTAGC 420
ATCCAGGCAT CAGCTCTCAG CCAAATTTCT TCCTGGGGGC TCAAAAAGGG GTTTCCAAAA 480
AGTCCAGTCC ACAGAATGAG GCACAGTTCA ATCCTCTAGG GACTCATCAC TAAGGGTGGT 540
TGCATAAGAA AAATTATGAA AAACCATCAC CCTCCAGTAC CATATGGGCT CTATTTCCAG 600
GCCAGCGCAA TTAAGAACAA TTTCACAAGG AAATAAAGGG ACCTAGTAGA ATAATTCAGA 660
ATAAAAACAT TATTGCCAAA TAAAGTACAA TCTTTTTTTA TTTTTTATTT ATTTATTTAT 720
TTTTGAGATG GAGTTTAGCT CTTTCGCCCA GGCTGGAGTG CAGTGGTGCT ATCTCGGCTC 780
ACCGCAACCT CCGCCTCTCA GGTTCAAGCA ATTCTCCTGC CTCAGCCTCC CAAGTAGCTG 840
GGATTACAGG TGCCCACCAC TACACCTGGC TAATTTTTGT ATTTTTTAGT AGAGACGGGG 900
TTTCACCATG TTGGCCAGGC TGGTCTCAAT CTCTTGACCT CAGGTGATCC GCCCGCCTTG 960
GCCTCCTAAA GTGCTGGGAT 980