Tag | Content |
---|
EnhancerAtlas ID | HS172-00673 |
Organism | Homo sapiens |
Tissue/cell | SGBS_adipocyte |
Coordinate | chr1:145113450-145115730 |
Target genes | Number: 19 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
LHX2 | MA0700.1 | chr1:145115574-145115584 | GTTAATTAGT | - | 6.02 | mix-a | MA0621.1 | chr1:145115573-145115584 | AGTTAATTAGT | + | 6.14 |
|
| Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
SE_00110 | chr1:145109341-145120995 | Adipose_Nuclei | SE_02370 | chr1:145113433-145116175 | Astrocytes | SE_09153 | chr1:145108944-145121268 | CD14 | SE_36703 | chr1:145112883-145116455 | HMEC | SE_37044 | chr1:145112592-145117027 | HSMMtube | SE_39012 | chr1:145112193-145116292 | IMR90 | SE_44224 | chr1:145112208-145121153 | NHDF-Ad | SE_44968 | chr1:145112756-145115992 | NHLF | SE_45537 | chr1:145109103-145121359 | Osteoblasts | SE_51844 | chr1:145113549-145115880 | Skeletal_Muscle_Myoblast | SE_55651 | chr1:145112164-145123546 | u87 | SE_63643 | chr1:145113469-145116071 | HSMM | SE_67559 | chr1:145112164-145123546 | u87 | SE_68407 | chr1:145053820-145118488 | TC71 | SE_68408 | chr1:145053820-145118488 | TC71 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 4 | ID | Chromosome | Start | End |
GH01I120157 | chr1 | 145113319 | 145115924 | GH01I148771 | chr1 | 145112227 | 145116926 | GH01I146321 | chr1 | 145112942 | 145116344 | GH01I149354 | chr1 | 145113079 | 145116277 |
|
Enhancer Sequence | GATAATTAAA TATTTTTATA TAATTTCATA TATTTTTTTG AGACAGAGTC TTGTTCTGTT 60 GCCCAGGCTG GAGTGCAATG GCACGATCTT GGCTCACTGC AACCTCCATC TCCTGGGTTC 120 AAGCGATCTT CCCACCTTAT CCTCCTGAGT AGCTGGGGCT ACAGGCATGT GCCACCACGC 180 CTGGCTAATT TTTGTATTTT CTTAGTAGAG ATGGGGTTTT GCCATGTTGT TCCGGCTGGT 240 CACAAACTCC AGGGCTCAAG CAATCCACTC ACTTCAGCTT CCCAAAGTGC TGGGATTACA 300 GGCATGAGCC ACAACACCCA GCCCTTTATA TAATTTTAAA AGTGTAGGTA ATTAGGTAAA 360 ATTAGGTTAA AAGTATATGT ATATTTACCT GATATTTAAA TATTACCTAA GTGTTTAATG 420 TGGACATGTA AGCTCTTTAA AGATAGTGCT TATGTATTTT ATATCTGTTT CACATACTCC 480 TTATATATCC CCCACAGAAA TGGTCACAAA TAGGTTCCTT AATAAGTATT TTTGAATTCA 540 GCCATGCTAT ATATTCATTA GTAAGTGAGT TTTCTTTTAT TATGAACTAC AAACTTTAAC 600 CTTTTTTTGA GTAGTGAGCA GTTATTCATT TACCTTCACA CTCTTTAAAT ACCAAATTTT 660 GAGTGAGTGA GTGTGTAAGG TTTTGTCATA CAGACTTGCA ATTCCTATAT GGGATAAAGT 720 AGACTAGCAC AGGAATTTTT CTTGTATCAC TCATGCAAGA CTCTAAATTC CTTAAAGGCA 780 GGGATCATGT ATATTTTGAT CACTGTTGTA TCCTCAGCAC TTCACATGGT GCCTGTCACA 840 TAAATATTTG TTAAATGACT TCTCCAAGCA ATAGCTTTGT CTTTATGTTA TCCTGTATTT 900 CAAAACGTTC ATATATAAAT TCTCTCAACT ATGACTTGTT TCATAGGGTC TAATAATTGT 960 TCCTCTGCTG AGTTATTCTC AGCAGATTTA GATTCATTTA GCAAATGTTT ATTGAGCACT 1020 AACTATATAC CAGGCCCTGT TCTGGGCATT CAGGATATAG CAGCAAACAC AATAATTTAA 1080 AATCCCTGTC CAGTGAAGTG TATATTCTTG TAGGCTCTGT AAAAAGATGC CCTGTGCATT 1140 GTCATGGTTA TTTCTCAGTC CCTGACTCTT CTTCCGTCAC TAGATGTTTT TCTTACTCAT 1200 GTGATCAGTT GCTAATTCAG ACGTGGCTGT CATGCCTGTG TTATTAAGTA ACGCCATGTT 1260 TCCCAATCAA AACCAGTCTC TATTAAGCAA CTCCAAATAT TCCAAAAGCA TTCTTTAAGG 1320 AAGAAACAGC CGGATTGCAA AATAGTTTTT TCTGAAATTT CAAGAAGTGA AAAGTTTGAT 1380 CAGAATTTAT TATGTCAAAT GGAGAGTTTG TGTTTATTAT TAAAATATGC CCTATATTTT 1440 AATATGGTCT AGCTTGTGTC TATCTGGCTA TTTCTCTAAG TGTTTAGTTA ACTGTTATAA 1500 GAAGATAACA ACATTACAAA TGTCCTTGGG GGTGAAAAAA CTTGCCAGAA AATACTAAAA 1560 AGCTTAATTT ACTTGCGTTT TTTTTTGTAG TACTTATTGT ATTTTAGTTA CAACTTTCCT 1620 ATGTCTATTG AAATATAAAT CCTGATAGCT TTAACTTCAT AGTAGTCTCT ACTATGTGGA 1680 GAATCTTAGA AATGTTAGCA GTCATCATTG AAGTATAGCT TAAGACTGTG TTTGGTTAAT 1740 TGAATTTTCT GGTTATCTGA GTTTGTTTTA CATGGATTAT CATTATCGTT TTTCAAAATA 1800 TAAGAGAATA TGATTCAGAC CATTAGAAGA TTATGAAGAT AATAATTATT AACATGTAAT 1860 AATTATTATA ATTTATCATG TGCAGGCATT GTTGCTCACT TTACAGGCAA TCTCATGTAC 1920 ATACAACTTT ATGACATAGT TACTGTTATT ATCCCCAATT ATAGATGAAG AAACTAGGTT 1980 TTAAATAGGT TACATGACTT GACCAATGTC ACATAACTTG TACAGGTGAT ATCTGAACCA 2040 AAGAGTCTGA GGCCAGAACC TGCACTTCTA ACCACCTTAC TATATAGCCT CAAAAATTCA 2100 GACATAATCT GATCAGCATC ATCAGTTAAT TAGTATATGC AATGTTAGCC TCAAAATAAA 2160 AATGATGATT TAAGATTCAT GGTTGTTGCA GTGCTGCTCA TTTTGGTTAT TTTTAATGCC 2220 TTAATACTTT CGGTAAAATA CTTCCAGGGA CTAATTAATG TTTTCCTTTT TTCCTCTTTG 2280
|