| Tag | Content |
|---|
EnhancerAtlas ID | HS167-02349 |
Organism | Homo sapiens |
Tissue/cell | Retina |
Coordinate | chr1:223935770-223936740 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| E2F6 | MA0471.1 | chr1:223936435-223936446 | CTTTCCCGCCC | - | 6.32 | | GATA2 | MA0036.3 | chr1:223936005-223936016 | AGAGATAAGAA | - | 6.32 | | Gata1 | MA0035.3 | chr1:223936005-223936016 | AGAGATAAGAA | - | 6.32 | | RORA(var.2) | MA0072.1 | chr1:223936034-223936048 | AAAATCTAGGTCAG | + | 6.14 | | Zfx | MA0146.2 | chr1:223936617-223936631 | CAGGCCTCGGCCGC | - | 7.95 |
|
| | Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
| SE_00224 | chr1:223934158-223937983 | Adipose_Nuclei | | SE_01908 | chr1:223935156-223937517 | Aorta | | SE_02306 | chr1:223935517-223937238 | Astrocytes | | SE_03438 | chr1:223935748-223936798 | Brain_Angular_Gyrus | | SE_04026 | chr1:223935516-223937349 | Brain_Anterior_Caudate | | SE_05036 | chr1:223934795-223935890 | Brain_Cingulate_Gyrus | | SE_05036 | chr1:223935985-223937127 | Brain_Cingulate_Gyrus | | SE_05972 | chr1:223934663-223937571 | Brain_Hippocampus_Middle | | SE_07159 | chr1:223935466-223937127 | Brain_Hippocampus_Middle_150 | | SE_07996 | chr1:223935109-223937042 | Brain_Inferior_Temporal_Lobe | | SE_23408 | chr1:223935446-223936989 | Colon_Crypt_1 | | SE_24051 | chr1:223935677-223936100 | Colon_Crypt_2 | | SE_24051 | chr1:223936159-223937066 | Colon_Crypt_2 | | SE_25230 | chr1:223936038-223937178 | Colon_Crypt_3 | | SE_26209 | chr1:223934955-223937096 | Duodenum_Smooth_Muscle | | SE_26925 | chr1:223935278-223937175 | Esophagus | | SE_31491 | chr1:223935283-223937172 | Gastric | | SE_33950 | chr1:223935223-223936500 | HCC1954 | | SE_34545 | chr1:223936173-223937185 | HCT-116 | | SE_37129 | chr1:223934990-223937353 | HSMMtube | | SE_38254 | chr1:223934520-223937640 | HUVEC | | SE_41495 | chr1:223935110-223937269 | Left_Ventricle | | SE_42269 | chr1:223934542-223937274 | Lung | | SE_45872 | chr1:223935399-223937657 | Osteoblasts | | SE_49408 | chr1:223935446-223937062 | Right_Atrium | | SE_50365 | chr1:223934678-223937079 | Sigmoid_Colon | | SE_53249 | chr1:223935441-223937088 | Small_Intestine | | SE_65644 | chr1:223934516-223937226 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I223746 | chr1 | 223934513 | 223937570 |
|
Enhancer Sequence | CTGCCACCTT CCCCTCCATC TGCAGTGCTG TGCAGCCTTC CCCTGCACTC TTGCAGAGCT 60
AATAGGCCCG TGGGAGACTT CGGAAGGAAG AGGAGGAAAG ATTTCCTCAT AATAGCCTTG 120
CTGGCAACGC TCACCAGGGG ATGGGAGGTG GGCACTGTGC CCAGGAGCCT TGGAGCAAAG 180
GCTGTGCCCA ACCTCTGAGC CCTGTCCCAT CCAGGTTCTG GTCTCTGCGG GGGACAGAGA 240
TAAGAAGCCC TGGCTTTTGG AGCCAAAATC TAGGTCAGAC TCCCTAGGCA GGAATTCTCA 300
AAGTTTATCA GCAGAACACG TTGAGGCAGA AGACCCTTTC TGCTCCAGCC CTTCTTCCCA 360
GGCTCAACCT TCATCAGAAT AGATAGGGGA AAGGAGAGGC TGTGAGGCGT TCTTAAAACA 420
GAAGCAAATT CTGACTCAGA CCGGAATAAA CAACCGTCCT AGTATAAACC CTACAGCTGG 480
GCTGGGCCAG ACCACGGAGC ATGGGCTGGT GGTGGGGCGA GGGTGTGCTC AGTGTCCCTG 540
GGCCACTCAA GGCTGTCTGG GTATCAGCCC TGCGCCATCG AGGACCCCCT CCGGCCCTCT 600
CTCGGCCGTG CGCCCTTTCC CTGCGCCATC GAGGACCCCC TCCAGCCCTC TCTCGGCCGT 660
GCGCCCTTTC CCGCCCTTCC CAGCCTGCAG AAATCCGTGG ATGCGCTATT CACACGGGAA 720
TGCCTGTGCT CGTTCCGCGA GAGGGTTGCA TTCCGCCTTT TCTCTGGTAT TCTCGGCGTT 780
CAAGCATTTG AACGGGGTAG GAAAGGTTCT CCAAGTGCAA GAAAGCGCAG CCCTGAGCCT 840
CCCACCCCAG GCCTCGGCCG CTGCGCTAGT GCGTCCGGCG GTCCCGCCCG GCAGTAGGAC 900
AGAGGGAGCG AGGGAGTCCG GGAGGAAGGG AGAGCGGGTG CGGCCAGTCT GACGGTTGCT 960
GTGTTTGCAG 970
|
