EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS167-01680

Organism

Homo sapiens

Tissue/cell

Retina

Coordinate

chr1:88927840-88929660

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:88929038-88929059	AAAAGGAAAGAGAAAGCAACC	-	7.5
IRF2	MA0051.1	chr1:88929042-88929060	GGAAAGAGAAAGCAACCC	+	6.21
POU2F2	MA0507.1	chr1:88928147-88928160	CTCATTTGCATAA	+	6.44
Pou2f3	MA0627.1	chr1:88928146-88928162	ACTCATTTGCATAATT	-	6

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I088461

chr1

88926796

88929544

Enhancer Sequence

AATTCAATTT CTGCTCATTA AATTGAATGT GCTCTGCGTT CCTCTCTGCA TTGCTTTGAG 60
CAAGCAGCTG AGAACAAGGG ACTAACATCA AAATTATTAA ATTGAGGAGA TTTTATTTGG 120
TCTTCACATG CCAGAGCCGC TTTGATGAGG AGCTGTTTTG GCACTGAAAG GAAAGAAGAG 180
CAGCTGGAGG AAAAATCAAA TGAAACTAAG CCTTGGAAAA TTGAAGAAAA CGCAAGCTTA 240
ATAATATTTA ATAATTAAAT TTCCACAAAC AATAGCGGCA AATGAAGTAA TCTGCAAAGT 300
CTGTGAACTC ATTTGCATAA TTGATGCCGG TCCCCTGTAA ATGAATAATG AAGATAATAA 360
AAGATGTTGC TAAAAATGGG CACAATAACA GCAAATTTCA TCAAGCCGCG CTCTCTGATT 420
AATCTGCTCT TGCAAATCAG CACCGAGAGG GGAGCGCGTG ATTAACCGCG CCGAGGACTG 480
CAGCAGGCGG CGGCGCTGCC CTTTCTCTGC GTGTCTCTGG GCGCGTCCTG CCCGCTCCCC 540
GCGCCGCCCG CGCTCCTCTC GCCGCAGCTG CCGCTGGGGC TGCCGCGGGC GCCGCTCAGC 600
CGGAGCGCGC CTCCGCCCGG CCCGCCCGCG CCCCGCAGCA GCGCGCTCGC TCCTTAACCA 660
CTTCGCCGCT GCCTTTCGTC GGGGCCGCGA GCGGGGCGAC GGCCGCCCAG CGCCCCTGGC 720
ACCCCTGATC TCCAGCCGGG GCTCCCGGCC CGCGCCTTGG TGGCTGGAGG CCCAGGATGA 780
GCCTCGATGG CGAGAGGCCC AGGATGCGCC ACCAGGCCGG GCTCACTTCT TTGACGCCGA 840
ATAAACTGAC AAAACAATTA GCTGGCCGGC TGGGGAAGGT GGTGGGTGAC TCAAATGCCA 900
GTCGGCTGCG TGCCCCCGCG CTTAGATGAG TCTGGGATTC TGGGCAGTTG GGACTTTCTT 960
TTCAGGAAAG GAGGTGAGAG GTGCCGGGGA AGCCCACACG AGCAGCCACT CTTGGAGAAA 1020
TGGGGAATGG CGCTGTAAAA GCGCAGGCCC TCCTCCTCCT CCTTTCTCCC CATCACACAA 1080
AAAGGATGGG CCTTGAAAGG GATGAGTTTA TTATGCACTT TTAAATGCCT ATTCAGAAAA 1140
GAACAGGAGG CAAAAATAAA GATGCTTCCC ACCCCACCAA TTCCCTTCCC TCGAAGAAAA 1200
AAGGAAAGAG AAAGCAACCC ACAAAGGTAA GCTGGGTATT TCAGATTTTG TGTCTTTTTT 1260
TTTTTTTTTG GAATCAAAAT AACATTTTCC AGTTTGCCAC TTACATTTTC GAGTGTATTT 1320
TTCTCAGGGC TAACTCTAGG GGTAATAAAA TCTCTGGAAG CTATTATGCC CATATACGTT 1380
TTAAGCAGGA GTTTGTGAAA GCAACTTTGC TGAGTGCAAA CTTGAGACGA TGAAACTGAA 1440
AATACTTTGA AAAACACACT ATCCTGTTCC AATGGAAATG CTGCACTTTA CCAGCTCTCT 1500
AGGACAAAGT TGTCTCAGGA AAATGAAATT GTTGATAAAC CATAGTTCCA GACTGTTACT 1560
TCACAGCCCT CAGATTGCAA TCAATCGTAG CCCGGGCCTA ACAGGACTGA CTCCAGCTTT 1620
TCATTTGTTT ATAGTGTGTG CAATGTTTTA TGCTTCAAAT GCACCATGTC AACTATGCAA 1680
AATGATGCAT AATTTTTGTT TGCATCCTGG ATCCACCTCC ACAATGGTTT TTGTTTAAAA 1740
TAAAGGTCAT GATTGTTTCC CATTATTACA GAATGGAAAC CGATCCTAGA CATCTGTGAA 1800
ACGTATCTTA AAAATTCCAC 1820