| Tag | Content |
|---|
EnhancerAtlas ID | HS167-01589 |
Organism | Homo sapiens |
Tissue/cell | Retina |
Coordinate | chr1:55034930-55038690 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gfi1b | MA0483.1 | chr1:55037323-55037334 | AAATCACAGCT | + | 6.14 | | JUN(var.2) | MA0489.1 | chr1:55035242-55035256 | CTGAGTCATTCCTT | - | 6.32 | | NKX2-3 | MA0672.1 | chr1:55035536-55035546 | TTCAAGTGGT | - | 6.02 | | Pou2f3 | MA0627.1 | chr1:55035681-55035697 | GTCTATGCAAATGCAA | + | 6.03 | | RFX1 | MA0509.2 | chr1:55038040-55038056 | TGTTGCCATGGTGACC | + | 6.63 | | RFX1 | MA0509.2 | chr1:55038040-55038056 | TGTTGCCATGGTGACC | - | 6.65 | | RFX2 | MA0600.2 | chr1:55038040-55038056 | TGTTGCCATGGTGACC | - | 6.73 | | RFX2 | MA0600.2 | chr1:55038040-55038056 | TGTTGCCATGGTGACC | + | 6.86 | | RFX5 | MA0510.2 | chr1:55038040-55038056 | TGTTGCCATGGTGACC | - | 6.57 | | RFX5 | MA0510.2 | chr1:55038040-55038056 | TGTTGCCATGGTGACC | + | 6.82 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_37464 | chr1:55034479-55035799 | HSMMtube | | SE_40638 | chr1:55033120-55039271 | Left_Ventricle | | SE_42452 | chr1:55033140-55036560 | Lung | | SE_42452 | chr1:55036652-55039162 | Lung | | SE_48928 | chr1:55034807-55036193 | Right_Atrium | | SE_48928 | chr1:55036780-55038785 | Right_Atrium | | SE_49475 | chr1:55034868-55035442 | Right_Ventricle | | SE_49475 | chr1:55035576-55036273 | Right_Ventricle | | SE_49475 | chr1:55036779-55038844 | Right_Ventricle |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 3 | ID | Chromosome | Start | End |
| GH01I054569 | chr1 | 55034874 | 55035474 | | GH01I054570 | chr1 | 55035577 | 55036273 | | GH01I054571 | chr1 | 55036874 | 55038248 |
|
Enhancer Sequence | GGCAGTGGGA GTTTTTAAAA AGATTTATGT TGATTCCCAG CTAGAATCGG CCCCTTCCTA 60
ACCTTGTCCA CCCCTTTGGG GTCTTGGTTT TACACTTTAC TAGGCCTCTT TCTGTCCTCT 120
AATCCAGCCA GCCTTTGGAT TTGCAGCCAG AGGCCTGACA CCCAGGCCAC ACGCAGCCTG 180
GCCCCCTCAC TGTCCCTCCG ACGGCCTGGT TGTCATCCTG AGCCACTCCT TGTTCCCTCT 240
GTTTTCCCCT TCACAGGACT GGGCCTCATG CTGCCTGCCA AATGCCAGTC TTGGGCTGTC 300
TCCTCCCTGC CACTGAGTCA TTCCTTCCCG AAATGCACTC CCTTCACCCC CCAACCCCTC 360
ACCACAGGGT GAAGCCTTCA ACAGCCACAG GGTGCCCATT TGGTTACAGC AGGAATTGTT 420
ATTGTTGAGT GTGTGGACAG ATGAAATAAT AAGGCTGTTT TCCCATAAAC AACTATTAAG 480
CTGGAGCCAC CCCAGCATGC ATACAACTTA AAAAAGTGAT AGCAACAGAA AAGCTTAAAT 540
GCAGGTTGAT AGAATGAGTC TTTTTCATTT TCATCTGCTT GGTTTTAAGT TTATGTGTTA 600
CAACCTTTCA AGTGGTCATC TAGGACCAGG TGTCTCTTCA GGTAAGCCAT TTGATCACAT 660
GTTGAATGGA GCAGGTACAT GTGGTACTTA ATTGGAGACA GCTCCCAGGT TCCATTGAAC 720
ACATATTTAC TGAGCACTTA CAATGTTCTG GGTCTATGCA AATGCAAATT TTGTCCATTC 780
CTAACCCAGT GGTCTGCTCC TGTGTGCCCA GCATGCCTTG TTCTCAGTGA ACCCGAGCTG 840
CTTTCTAGTG ACTGTTGCCT TCTATTCCAA TAATCCATTT CCCTCATGAG GTGTCTTGAG 900
CCTCTCGAGG GCCTACAAAA TGCAAAGGCT TCCCAGCAGT TGTGGAGTCT GGTTAGACCA 960
TATGTGGGCG TCTGCGGGAG GCTTCGTAGA GTGCCACAGA CTCTGTCCTA TTCCACATCT 1020
TGATTCTTGG TTGAAATGAA CCACAAACCA ATGAATTCTG TCTTGGTAGA GAGAGGATGT 1080
GTTCAACTGG CAGTGCCAGG AGGGAAAGCA GATGCCATTG TCATAGCCCA GGGCTGAAAG 1140
GCTCCATCTG ACCCCCACTG CTCTGCAAAG GCCATCTGGC CAGTCACAGC ACTTACCCTT 1200
GGGACCTGTT TAGGCCCTTC CTCACTAGAA TGGTTTTCTG GGTCTTTCTA CAACACCTTG 1260
CCCTTTTTAT TTTTTGAGAC AGAGTCTCGC TGTCACCCAG GCTGGACTAC AGTGGAGTGA 1320
TCTCAGCTCA CTACAACCTC CACCTCCTGG GTTCAAGCGA TTCTCCTGCC TCAGCCTCCC 1380
AAAGTGCTGG CTGGGATTAC AGGCATGAGC CACCGTGCCT GGCCTTTTTT TTTTTTTGAG 1440
ACAGAGTCTC GCCCTGTTGC CCAGGTTGGA TGGAGTACAG CAGCAAGATC TTGGCTCATT 1500
GTGACCTCTA CCTCCCAGGT TCAAGCGACT CTCCTGCCTC AGCCTACCGA GTAGCTGGGA 1560
TTACAGGCAC CCGCCACCAC ACCCAGCTAA TTTTTTTGTA TTTTTAGTAA TGACAGAGTT 1620
TCACCATGTT GGCCAGCCTG GTCTCAAACT CCTGGCCTCA AGTGATCTGC CTGCCTCGGC 1680
CTCCCAAAGT GCTGGGATTA CAGGCCTGCC TTGGCTTTTT AACAACATGA AGGCACTTCC 1740
TATGAGTCAG ATCCTGTTCT AAGCACTTTA CATGTATAAT CTCATTGAAT CCCAATTATG 1800
ATATTCTCTC TCTCTTTTTT TTTTTTTTTT AAAGAGACAG GGTCTCACTC TGTCACCCAG 1860
GCTGGGTAAC TATGATATTC TTATTCCCAT TTGACAGATG TGGATATGGA GGTTCAGAAT 1920
GGCTCAAGTA AAATGGCTTC GGGTTATCTA GCCAGACAGT CTGAAGCCCT TGGGCCTTGC 1980
TGTCCTCTTT GCCAGCCCCC ATGCCTTCCT GTTTCTTTCT TCTCTCTTTC TCTTCACCCT 2040
TCTGATTATT TCAATAAACC TTCTTGTAGG CTCAAATTCC TCTGAGACAG TGTAGGAAAA 2100
TATGGGGATG GGAGTGGAAT TGGAACAGGT CTGATAGGGC TACTTTGCAG CCAGAGAGCT 2160
TGAGGCTGAA GGCAGCATCT GGAGTGTGGA TGGTGCCGCG TAGAGAGTTG CTGGCACACC 2220
TGCTGAGCTC AGCTGCCTCT GCCAGAGACT AGATTGTGCT CAGCTCTGGA CCTCCTAATG 2280
CCCAGATTTG GCAGCTTGGG CCTTAGAAGC AGCACCACAG GTTCCTCTGC TAAGCCTTGT 2340
TCTGAGACCT GCTCTGCAAC ACCTGCAGTG TAAGGGCACT CCTTCAGTGA GTAAAATCAC 2400
AGCTCCTCTC CCACCTCTCT GCTCCGCTCA GGAATGTTTT CTTGAACACT CCTGGGAAAA 2460
TGAAAATGTT GTTATGTTGT GCAAGGGGAA GCTGGGTAAG GTGGGAAGAA GAGAGCCAGA 2520
GGATAGCAGG CCTGGGCAGG CAGGAGGGCC CTGGGAACCA TCTGGGGCCT TGGGGTAGTG 2580
AGGGGGATGC TGAGTGGGGA GGTGCTGCTG GGGGAGCTGG GAGAAGGGGC CCCACTTTCT 2640
GGGGAGGAAG AGGACATCAT CCCCAGCAGG AAGGGCCCGC AGGACCCTGG AGCAGCCGCT 2700
GGGGCCTTGA AGGGGCCCAC TGGGCTGCTG GTTTCCTGGG GCAGGAAGTC CTGGCTGCAG 2760
CCAGAATTTG GCCAGGGGAG GGCAGCTCAG GCAGGAGGAA GGTGCACAGT GGGGGAGGTC 2820
TGGAGCCTGT CCTCCCTTCC TGCTCGCCTC TCTTCTGCTT GCTCTGTTCC CTGCCAGCCT 2880
CTGTTTTTCT CTCGCTCTGA CCTCTGCATT GTTCCTTCCC TCCTGTCTTT GACGCCTTTC 2940
CTTTCTCTCT CTCTGACTCT GGTTTCTTCT CCTTTCCCTC TGCTCTCTCT CATTCTCTCT 3000
CTCTTGCTCT CCTGAAGGGG AATTGTGATG CCTGTAGCTG CTGTGCCCAG CTCCAGGGTA 3060
AACAGAGTTG CTTGCAGGAT GGTAGGGCCC GGGTCCATTG CCTGGCCACC TGTTGCCATG 3120
GTGACCCAGA GGCAGCACAG GCAGCAGCCT TGGCTGTCTG GCAGGTAGGG CAGGGGTCTG 3180
AGGAGGGGAA GAGGCCGGGT CTGTCCTTCA CAGCCCCAGA ATGGCCCACC CCACCGTCAG 3240
GGCCTGTGGC ATGGGGGTGA CTGCCTGTGA ACATGGGTTC TGTACTGGGT GCTGTCAAAG 3300
CAGCTCCCCT GAGGGGGGGG GTCACACGGA AAGGGCGGGT CATTCATACT TGGGGTCAGA 3360
CTCAGACTGC CTGTGTTCTA ATCGCTTCTG GCCACTTTTG TGGTCTGCTG GAGGTAGAGG 3420
GTGGGAGGTG GCAAATAGCC CCAAGGGAGG AAGCCACAGG GAGGCAGCTA GTGAGTGGGA 3480
CATAGGGAAG AACAGGCAGA TTTGCTCTTT AGCAGAAGGG TCTCCCTTGG AAGGGAGTGA 3540
GCCCTCTGCT TCTGGGAGCA AACAAGCTCA TGCTGGACAG CCACCAGAGG CAGTGTGGCG 3600
GGCTGAGATT TCTGCACCTG AGAGAGGCCT GTCTAGCTGA ACCTGAGGTT TCCTCCCACT 3660
CTGAGAGCTG AGAATTTATA AAGTACAGTT TTCAGCTCCC TGAGAGTTTG CAATTTCCTC 3720
ACTGACAGTG GCCCAGTGGG ACAGTGTTCT GGAAAGTGCC 3760
|
