Tag | Content |
---|
EnhancerAtlas ID | HS167-00401 |
Organism | Homo sapiens |
Tissue/cell | Retina |
Coordinate | chr1:6642360-6645970 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Hnf4a | MA0114.3 | chr1:6642614-6642630 | TGTGGACCTTGACCTC | - | 6.23 | IRF1 | MA0050.2 | chr1:6643830-6643851 | TTTTACTTTTTTTTTTTTTTT | + | 6.16 | Nr2f6(var.2) | MA0728.1 | chr1:6643579-6643594 | TGAACTCCTGACCTT | - | 6.04 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_09798 | chr1:6639017-6643128 | CD14 | SE_24407 | chr1:6641696-6642973 | Colon_Crypt_2 | SE_26672 | chr1:6641662-6642914 | Esophagus | SE_40857 | chr1:6641740-6642889 | Left_Ventricle | SE_53559 | chr1:6641550-6643027 | Spleen | SE_58743 | chr1:6616886-6664806 | Ly1 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 6644800 | 6645600 | chr1 | 6644635 | 6644756 |
|
Enhancer Sequence | TAAACGTTCT GTTTTTCTAT TTTCTTTTCC TGTCTGCCAT TCCCACGTTG GGGGAGGGGT 60 CCTGCACTTC CCACTTCTGG GTGAGGTAGG GGCTGGGGGA TCCATCTCAG ACCCACATAG 120 TGTCTGGCCT TGGTACACCT CTGATAATCA GGAAGTGAGA GCCTGCTTTG GGTTGGATTC 180 TTCTTCCTTG CTGTCCTGTG AGTACTCTGG TTGGAGATGG GTTTGTGTAC ATCTTGTCAA 240 CAGGTTCCAC CCACTGTGGA CCTTGACCTC CAGCTGGTCT CTGCTAACAG AATGAGAAAC 300 CTGTGGCCCC TGTGCTAGAG CTGGGGCCCA ACCTTAGGTG TTTCTGAAGC CTGGCAGTGT 360 GGGCTTGAAG CCTGGCAGTG TGGGCTTTGG GCCACAGTGC CAAGCCTTGG TTCAGTGCTA 420 CCTGCGTTTC CAGGGAAGTG TTCACTCTGG GGTGTCAGTG GGGCATTCAA GTCTATTTGT 480 CTAAACCTTC AGCGTCCAAT AAAGTAACCA GGAACTCCAG GAGCTATTAC AATTTTTATT 540 TTTACATTTA ATGGAGACAA GGTTTTGCTC TGTTGCCCAG GCTGGTCTCA AACTCCTGGG 600 CTCAATCGAT CCACCCACCC TGGCCTCCCA AAGTGCTGGA ATTATAGGTG TGAGCCACCA 660 TGCCCAGCCC CCAGGGGCTA TTTTATGTTT TTTGTTTGTT TTTGTTTTTG AGTTGGAGTC 720 TTGCTCTGTC ACCAGGCTAG AGTGCAGTAG CGTGATCTCA GCTCAGTGCA ACCTCTGCCT 780 CCTGGGTTCA AGTGATTCCT CTGCTTCAGC CTCCCAAATA GCTGGGATTA CAGGCACATG 840 CCACCACACC CGGCTAATTT TTTGTATTTT AGTAGAGACG GGGTTTCACC ATGATGGCCA 900 TGATGGTCTC AATCTCCTGA CCTTGTGATC CACCCGCCTT GGCCTCCCAA AGTGCTGGGA 960 TTACAGGTGT GAGCCACCAT GCTCAGCCTA TGTTGTTTTT CATTTTATTT TATTTTTTTG 1020 AGACGGAGTC TCACTCTGTT GCCAGGCTGG AGTGCAGTGG CATGAGATCG GCTCACTGCA 1080 ACCTCCGCCT CCTGGGTTCA AGCGATTCTC CTGTCTCAGC CTCCCGAGTA GCTGGGATTA 1140 CAGGTGCCTG CCACCACGCC TGGCTAATAT TTGTATTTTT AGTAGAGATG GGGCTTCACT 1200 ATCTTGGCCA GGCTGGTCTT GAACTCCTGA CCTTGTGATC CACCTGCCTC GGCCTCCCAA 1260 AGTGCTGGGA CTACAGGCAT GAGCCACTGC GCCCAGCCTG TTATTTTTTT TTTTTTTTTT 1320 GAGACAGTCT CACTGTGTCG CCCAGGTTGG AGTGCAGTGG CATGATCTTG GCTCACTGCA 1380 ACTTCTGTCT CCCAGGTTTA AGCGATTCTC CTGCCTCAGC CTCCTCAGTA GCTGGGACTA 1440 CAGGTGCGCA CCACTACGCC CAGCTAATTG TTTTACTTTT TTTTTTTTTT TTTTTTGAGA 1500 TGGAGTCTCC CCTCTGTCGC CCAGGCTGGA GTGTGGTGGC TCCGTCTAAG CTCACTACAA 1560 CCTCTGCCTC CCAGGTTCAA GCGATTCTCC TGCCTCAGCC TCCTGAGTAG CTGGGATTAC 1620 AGGCACGCGC CACCACACCT GGCTAATTTT TTTGTGTGTG TTTAGTAGAG ACAGGGTTTC 1680 AGCATGTTGG TCAGGCTGGT TTCGAACTCC TGACCTTGTG ATCCACCTGC CTCAGCCTCC 1740 CAAAGTGCTG GGATTACAGG CGTGAGCCAC CGTGCCCAGC CATTTTTTTA CTTTTTAGTA 1800 GTGATGGGTT TCACCATATT GGCCAGGCTG ATCTCAAACT CCTGACCTTG CGATCCACCT 1860 GCCTTAGCTT CCCAAAGTGC TGGGATTACA GGCGAGAGCC ACCGTGCCCA GCCCCCAGGG 1920 ACTATTTTAA CTTAAAATTT AAAATTAAAT AAAAATTCAG TTCCTCAGAT ACGTTAGCCA 1980 AATCTGAAGT GGTGAGGAAC CACGTGTCTC CTGGTGGCTG AATCGGGCAG TGCTGACATA 2040 GCACATTTCC ATCATCGTGG AGAATCCCCT TGGGCGGCAC TGCTTTGGAG TCCCTGCAAG 2100 GCCTGTGGGG ATGGCGGCCC AGTGGCATGC CTTCCAGTCC TGCCACTCCC AGCCAAGACA 2160 TCACTAGTCT ATCATGGTGT GTTTTCTTGC CATGCCAGGT TGGGCGGCAC ACTAGTAATC 2220 ACCTAGAATG GGAGCCAGGG GGAAACCCGT TCGCTGTCCC TGTGCACCGT GTTCAGGGCA 2280 GCTGCTGCCA GTGGAATGCT GGGATAACCC CAGTGTCGGG GGTCCTGGGG CAGCCTGTGT 2340 ACTGCTGGAT GCTTGCTTTC AAGTACTCTG CTGGGGTAAG ACTCTGGGGC AGTTTCCATC 2400 CCTTCCTTGG GCTTCAGCTT GCTGGACTGG CCCTGAGAAC TGGGAGGGGA TGGCTTCATG 2460 AAGTCATTTT GATGGGGGAT GAAGATAGTT GCTGTAGAGG AAGAGGATGA GAGAGCTGCT 2520 TGGCCTCTGG AAGGTGGGAG GAGCTGTCGC AGGCTGCACA GGGGCTCTGA GGTCGAGTTC 2580 GTTTAGTTCA TTGATTAAGC AGTCTACCAG GTGGCCAGCA AGGCTTTGTG GGTGCTTGGG 2640 ATGCATTTAA GGGAACTAAA CAAAGGTGCT TGTGCAGCCG ACCTGCTTGC CAGGCAATGC 2700 AGATAACAGA TAAGTCCATC TGCCTGCAGT AGACGGTGAG GAAGTGCTGC CGAAGAAGAA 2760 AAAGCAGAGG CGGGCCAAGG GGTTGGGGAG TTGTGAGTGG GGTTCGATTG CGATTTTAAG 2820 TAGCCAGGGT CTCTAGAGTC TTACTGAGAA GGTGAGATTT AAGCAAAGAC TCAAAGGAGG 2880 TGAGGAAGTT GACCAAGTGG GTGACTGGGG AGCATCTGGG CAGAGAGAAG AGCCAGGGCG 2940 CTGGGGTAGG AGGATCCTGG GGGCGTGACA GGCAGCAAGG AGGCACATGC CTGATCCAGG 3000 TGGCCAGACG ACACCCTGGG AGAGAAGCAG GCAAGGGGAG GGCTGCCTGC GCCTTGATAG 3060 GCCTCCCGGG CCCTTTCTCT GAATGGGGAA GCACTGGGGA TACGTGAGCC AAGAGGTACT 3120 GAGGTCTGAC TTAAAGGTCC TTCTGGCTCC TGAACTGAAA CCTGTGGGGG AGGCAGTCAC 3180 GGAGCGGGGA GACCAGATGG GCAGCTCCCC TGGCTACCTG GGAGAAGCTG TTGCCAGCCT 3240 TGGTGGGCCA GTGGAGTCAG GTGAGGATCT GGCCATGGGT TTGAAGCTCT GGGAAGACTG 3300 AGTTGCTTCT CCAATAGTCA GGACCCAAGA TCTGTTTCTG CCTTCAGACA GAATGCGGTC 3360 AGCTGGGCCT CCCTGTCGGC CTCTGTGCTG GCCAGATCCA TGGCAGCCTC TTAGGACCTG 3420 TGTGAGCTTC TTGCCACTGC ACTCTCCCTT GCAGAGTCTC CATGCTGGGG GAGGCTTCTG 3480 GGCTTGTCCC TGCACCTTAA CCAGCCGGTG TCACCTGAGA ACACTTGTTC CCCTTAGAAG 3540 GGACCCAGAG GGGGCCCTGG GTGAGGGAGA GATGGGAAAC CCTCTCAGCC CCCCCACCCC 3600 TGTGGCTTCT 3610
|