Tag | Content |
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EnhancerAtlas ID | HS165-01417 |
Organism | Homo sapiens |
Tissue/cell | Ramos |
Coordinate | chr1:226884160-226886820 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NR2C2 | MA0504.1 | chr1:226885200-226885215 | GGGTGTCAGAGGTCA | + | 6.34 | SCRT1 | MA0743.1 | chr1:226886569-226886584 | TCCAACCTGTTGCAC | - | 6.32 | SCRT2 | MA0744.1 | chr1:226886571-226886584 | CAACCTGTTGCAC | - | 6.46 |
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| Number of super-enhancer constituents: 35 | ID | Coordinate | Tissue/cell |
SE_00103 | chr1:226883705-226886259 | Adipose_Nuclei | SE_03159 | chr1:226885602-226886202 | Brain_Angular_Gyrus | SE_03869 | chr1:226882978-226886945 | Brain_Anterior_Caudate | SE_04801 | chr1:226882860-226887506 | Brain_Cingulate_Gyrus | SE_05781 | chr1:226882582-226887714 | Brain_Hippocampus_Middle | SE_06710 | chr1:226882929-226887612 | Brain_Hippocampus_Middle_150 | SE_07746 | chr1:226861943-226887535 | Brain_Inferior_Temporal_Lobe | SE_10211 | chr1:226883113-226887633 | CD19_Primary | SE_10887 | chr1:226873819-226893407 | CD20 | SE_11833 | chr1:226884870-226885986 | CD3 | SE_14432 | chr1:226885121-226886000 | CD4_Memory_Primary_7pool | SE_15808 | chr1:226885089-226885992 | CD4_Naive_Primary_7pool | SE_15808 | chr1:226886464-226887195 | CD4_Naive_Primary_7pool | SE_17296 | chr1:226856971-226887803 | CD4p_CD25-_CD45RAp_Naive | SE_17765 | chr1:226858457-226887760 | CD4p_CD25-_CD45ROp_Memory | SE_18263 | chr1:226857891-226887822 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19160 | chr1:226883999-226886167 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20012 | chr1:226883215-226887069 | CD56 | SE_21910 | chr1:226883715-226886974 | CD8_Naive_8pool | SE_22315 | chr1:226882979-226887479 | CD8_primiary | SE_25774 | chr1:226883181-226887670 | Duodenum_Smooth_Muscle | SE_26570 | chr1:226883956-226887261 | Esophagus | SE_29606 | chr1:226884506-226885789 | Fetal_Muscle | SE_40782 | chr1:226884801-226885783 | Left_Ventricle | SE_48218 | chr1:226884845-226887424 | Psoas_Muscle | SE_50140 | chr1:226884168-226886179 | Sigmoid_Colon | SE_51367 | chr1:226884676-226887386 | Skeletal_Muscle | SE_52562 | chr1:226884081-226886148 | Small_Intestine | SE_53341 | chr1:226884203-226886402 | Spleen | SE_54498 | chr1:226882945-226887509 | Stomach_Smooth_Muscle | SE_58303 | chr1:226819953-226937809 | Ly1 | SE_59629 | chr1:226819233-226928465 | Ly4 | SE_60416 | chr1:226819368-226929640 | DHL6 | SE_61009 | chr1:226812849-226900772 | HBL1 | SE_62233 | chr1:226813614-226929647 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr1 | 226884430 | 226886000 | chr1 | 226886537 | 226886643 | chr1 | 226884586 | 226885786 | chr1 | 226884834 | 226885233 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I226695 | chr1 | 226883341 | 226887082 |
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Enhancer Sequence | ACCGGCTTCC ACTTCCGACA AGGCCAAAAC TTAGAGACGA AATGGCACAT GCCCGGCCCC 60 TGTATTTTCT ACTGTTTTCT GAGAACATAA TTTCTAGTTG GAGTATTAAT TACTAGCTTG 120 GAGCATTACT AGCTGCTGCT ATTTCTCAGG GTCCCCTTGG AGACCAAGCA ACCGCTAAGA 180 TGGCTGGCTT TCTCCATAGA ACTCACAGCT AGCACCAGCA ATGAGGAAAT ACGCACACGC 240 GCACACACAC ACACGCAGTC TTTACATCTG GTTAGGGCTC CAAGTATTTC CTAAGTGTCT 300 CATCACACTT ACTAAGGCCT GAGAATCTCA GAGCTGAGAC ACTGCAGAGG TGATGTAGCC 360 CAAGCCATCC CCTGAGGCCT GAGTGTCCTC TGCAGCACCC GACTAGGGGC CGGGGGGTTA 420 GCACAACCTG TCCCCATTCC CAGGAAAAAA CCCAGCACAC AGCTCACACT CAATGATGTC 480 AGCTTCCTAC AGGAAGGACA GGTACAGCAT CACTAATTAA AAAGAGGTCA CAACCACGAA 540 GTTCATTCAT CCAGGCCTCT TGGGAACAAA TCATATCAAC AACCACCAAA CAAATGGATT 600 CATGTTAATT TGGAGGTATT CTTATCTGAG AGCAATAGAA TATAGTTCAC CAAAGCAGAA 660 ACCTGGGCAA GCGTCAACTA AATGTTGGTG GGTCCAGGAA GAAATCCACT GATTCAGGCT 720 AGGTGCCTGT CACAACTTGG TTAGCCTTTC TGAACCTGTT TCCTTGTCTG AAAGATGAAA 780 GTAGCAATAG TTGCTGTGAG GCGTGATTAA GGCATGATGC ATTCAGAGGC ATAGTACAGT 840 GTCTGGCAAA GATTCAAGAA ACTTTAGACT CTTTCCCCTT TCTGCACCAA TAAGCAAATC 900 TGAAAAGATC ATGAATACAC AGTGCTGCAA AATGAGAAAC AGAATTTCCC CCTTTAGACA 960 AGAGAGCACT GTGATGCAGA CACAGCCCTG GCATCAGCAA GGAAGGCCCT GGTTCCCCTT 1020 CTCATCATCC CTGGAGAGAT GGGTGTCAGA GGTCAGGTGA GGGAATCTCT TTGTGCGTGA 1080 TTCTCCAACT CTGCAAACAA TAGCTGGCCA TTTCTTCTGA GGAATAAGCT GAAATCAAAC 1140 ATACCTGATA GGCGAACTGG GCTTGATGCA GTCCCAAGCA CTCTGCTGAG CACTGAAGCC 1200 ACTTTTCCTC ACCACAACTA TGGGAGCTAG AGAAGGGAGG CGATTAGTGG TGAAGACAGT 1260 GGGGACCTGC CCCAGGTGGC ATTAGTGAAA TAGACAATTC TCTAGGGTCC TCTGCACCAA 1320 CCCAGAACTC TCCACATAAG AGCTGCCCTA GGAACACCAC AGTTCTGTGG CCTGCCCTGG 1380 CAGATGTGCC CTCACATCTG GGTGATAAGG GGTCCCCAAG AGGAGCCAAA CCCCCTGGGG 1440 GCAGCCCGGT CACAGCCACA ACTGGCTGCC CACAGGCTGG GAGCCACTCA ACTCAGAGGC 1500 AGAGTCCTAT GCACTGCACT CTCCAGACAG ATGGAAGGAC ACTCCCCCCG GGGCAGAACA 1560 GCACTGTAGA CTGAAGGACA GCTTTGAATC TGTCTGCCCA ACCGGTTCAA ATCTTGTTTT 1620 CTGTCCCCTA AATGTCACCA GTGTAACTGT CAAGGGGCCA AGGGGAATCA CCCAAATTGG 1680 ACAGCACCTT CAGGGCAGAA GCTCTGTTTG ATTTATCTTT TGTTTCCACA GCACCTAGCC 1740 TACTGCCTGG CACAGAGTGG ATATTCAGGA AATTTCTGTT CATGTGAAAG ATGAGAAAGG 1800 TCACAGACTC CTTAAGATCC CTAAAGCAGC TACGACAGCT CATTTCTGGA CTGAGCAGAG 1860 CTGACCTTAG AGGCCAGAAG GGCAGGGCTA GGGATGCTGA CTGCTAGGGG GATGAGAAAC 1920 CTCTCTTAAA TCAGAGTATG GAGGCACTGG GCCAATTAGA GGAGGACCAA CCTTTCAGAA 1980 TCGTAAGACT GGAAAGTGTG TGCCTTCACG TTTCATTTTG CCTCTCCCCA GACTAAACCA 2040 ACTAAACCAT CTCTGGAAAA GACAGAGGCC AAGGTGACAG GAATTGTTCA TTTATATATG 2100 AATGAGGCGT TGCTAAGTCA TCAGAGGCTG GAGAAAAATG GAAGACTCTT TTTCCCAGGT 2160 TGCCAACCTC AAAGTTAGGT AACTATTGGC AGAGGTCAGA CTAGGAAGAG GACAGGCATG 2220 ATCTGCAGGA GGTTATGGAA AGCAGCATCC CAGATGGGGC AGCCCTCCCT GCTCCAGGCC 2280 ACTGGGCTAG AGCTCAGCTC TGGACTGGCT TCTCATCCTG TCCTGCTGAC TGCATAGTCA 2340 CAGATCTGCT GATAGTCTCC AGACAAGACT AGCTCTGCTA CCCTGGTCAT ATCTCAGGCT 2400 GGTACCCTCT CCAACCTGTT GCACCTATTT GCTTAAAATT AAGAGGGCTG AGCTGGGCAG 2460 TGCAAGAAAG AACTAGAAAG CCAGTCTCAC CTGGAAACTC TACCAACTGC TATGAAGGAC 2520 ACAGGGAAGA GGTGGCAGGC AGGAACAATG CCTTAAGTTT TCCCCAGGTT CCTTGAACTC 2580 TCCATGGCCC TCTGGCCTCC CCTCACCCCC ACTACCTCTC ATAAGGAAGC AGCCCTGGCT 2640 TTCTAGTATG CTGATAATAA 2660
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