Tag | Content |
---|
EnhancerAtlas ID | HS165-01237 |
Organism | Homo sapiens |
Tissue/cell | Ramos |
Coordinate | chr1:198596640-198597330 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXA1 | MA0148.4 | chr1:198596946-198596962 | TATTGTTTACTTTACA | - | 6.1 | SOX10 | MA0442.2 | chr1:198597146-198597157 | AAAACAAAGGA | + | 6.32 | Six3 | MA0631.1 | chr1:198597043-198597060 | AATAAGGTATCACAAAT | + | 6.69 | Sox3 | MA0514.1 | chr1:198597146-198597156 | AAAACAAAGG | - | 6.02 |
|
| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_10874 | chr1:198579403-198671825 | CD20 | SE_11822 | chr1:198595602-198598008 | CD3 | SE_14382 | chr1:198595562-198599007 | CD4_Memory_Primary_7pool | SE_15405 | chr1:198596014-198598029 | CD4_Memory_Primary_8pool | SE_15805 | chr1:198596097-198597779 | CD4_Naive_Primary_7pool | SE_16283 | chr1:198595877-198597977 | CD4_Naive_Primary_8pool | SE_17305 | chr1:198587675-198600249 | CD4p_CD25-_CD45RAp_Naive | SE_17776 | chr1:198587525-198598559 | CD4p_CD25-_CD45ROp_Memory | SE_18245 | chr1:198586009-198601808 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19995 | chr1:198595492-198597861 | CD56 | SE_21924 | chr1:198595528-198599107 | CD8_Naive_8pool | SE_22285 | chr1:198585323-198601107 | CD8_primiary | SE_39433 | chr1:198596720-198598847 | Jurkat | SE_49861 | chr1:198596427-198598352 | RPMI-8402 | SE_58290 | chr1:198564715-198671046 | Ly1 | SE_59080 | chr1:198588455-198654514 | Ly3 | SE_59608 | chr1:198585244-198671628 | Ly4 | SE_60444 | chr1:198588133-198656098 | DHL6 | SE_61004 | chr1:198588339-198656148 | HBL1 | SE_61429 | chr1:198565046-198658062 | Toledo | SE_62210 | chr1:198565497-198666528 | Tonsil | SE_66263 | chr1:198596720-198598847 | Jurkat |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I198626 | chr1 | 198595799 | 198597729 |
|
Enhancer Sequence | AGCTATGGGA AGTTTCTTTA CTAATTTGGA CCCGTTCACT CATCTGCAAA AATGATGATG 60 CTAACAGTAC CTCCCTCATC CTGGTGCTAT GATTAAGGGA GAAAATTCAT GTGAATGCTC 120 AGCACAGTGC CTGAAATGTA GTGAGCACTA TACTACCACT AGTAGTAGTT TTTGAGAAAA 180 ACACAAGTAA TTAAAACTGA AACTCCTCTT TTGGTACTTT AAATGGTAAG TGAGTCCCAT 240 AGAATTGTGC AAGCACATGA TATTTTTCTA TTTTCACTTC AGTTCACTTC TGTGATGTCT 300 TTGTTATATT GTTTACTTTA CAAGATTTTT TGTAACATGA AAAATTACTA CCTTACACAG 360 TAACAGTCCA TAAAAATGAA AGTAACAAGA TTATTTGGCA GGAAATAAGG TATCACAAAT 420 GCTGCACGTC TATAAAACAA GTAACATTTT AAAAGTAATA TCCCTTTGGC ACCAACAAAA 480 CCCAATGCTT GGCATTCATC TAAGAGAAAA CAAAGGAAAT GTTAAAGATC TAAGCAAATC 540 CTGAAGGCTC AAACAGACTT ATATTTTATC AAAACTTGAA CATACATACA CATATATTTG 600 TTTATACATC TATCACATAT AATATTATAT TACAGGTAGT TGTGCTTTTG TCATTTTCCT 660 CCCTGGACTG AACTCCTTGA CAACACAGAT 690
|