EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS161-00623

Organism

Homo sapiens

Tissue/cell

PC3

Coordinate

chr1:43392910-43393270

Target genes

Number: 21
Name	Ensembl ID

YBX1	ENSG00000065978
LEPRE1	ENSG00000117385
RP5	ENSG00000228452
ERMAP	ENSG00000164010
CCDC23	ENSG00000177868
RP11	ENSG00000237090
ATP6V1E1P1	ENSG00000225099
SLC2A1	ENSG00000117394
FAM183A	ENSG00000186973
WDR65	ENSG00000243710
EBNA1BP2	ENSG00000117395
TMEM125	ENSG00000179178
C1orf210	ENSG00000253313
TIE1	ENSG00000066056
MPL	ENSG00000117400
RP1	ENSG00000234694
CDC20	ENSG00000117399
ELOVL1	ENSG00000066322
MED8	ENSG00000159479
SZT2	ENSG00000198198
PTPRF	ENSG00000142949

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MITF	MA0620.2	chr1:43393138-43393156	CTTGGTCATGTGACCTGG	+	6.53
MITF	MA0620.2	chr1:43393138-43393156	CTTGGTCATGTGACCTGG	-	6.53

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_06192	chr1:43388025-43393974	Brain_Hippocampus_Middle
SE_11009	chr1:43387831-43425728	CD20
SE_34353	chr1:43391917-43393254	HCT-116
SE_58561	chr1:43388242-43430420	Ly1
SE_60624	chr1:43388552-43428820	DHL6
SE_62392	chr1:43388423-43425814	Tonsil
SE_68708	chr1:43393050-43401454	H9

Enhancer Sequence

TGCTGAAAGA CACACAGACA CACTTGGTTG GAGTCATGAC CCTACATCCT GGCTGTAGGA 60
CTTTGGATAA GTCACTTTAC CTTTGGGCCT TTGAGCTGAA AAGGGAACAT CCACCTACCC 120
AGGGATGCTA TCATAATTAA CTGAGACCAC GCTTGTACCT AGAATGTAAC AGGCTCCAGG 180
AGCACCATTC AAGGCTAAGG GGAGAACCCT GGAGTTGAGG TCAGCATTCT TGGTCATGTG 240
ACCTGGGCTT CCTACCCTCA GTTTCCTCCT CAGCATGATT CCTAATGAGA ATGCTGGGCC 300
AGCACTTTGC ACAGCACTGT GGGGTCATGC GTGCGGGTGA GTATAGAGAC AGTGGGGGTT 360