EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS161-00311

Organism

Homo sapiens

Tissue/cell

PC3

Coordinate

chr1:22368550-22369110

Target genes

Number: 6
Name	Ensembl ID

RAP1GAP	ENSG00000076864
USP48	ENSG00000090686
RP1	ENSG00000228397
LINC00339	ENSG00000218510
CDC42	ENSG00000070831
WNT4	ENSG00000162552

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_11109	chr1:22363851-22370243	CD20
SE_12053	chr1:22365727-22368757	CD3
SE_14473	chr1:22363764-22368894	CD4_Memory_Primary_7pool
SE_17408	chr1:22363787-22368900	CD4p_CD25-_CD45RAp_Naive
SE_18011	chr1:22365280-22368936	CD4p_CD25-_CD45ROp_Memory
SE_18436	chr1:22367611-22368743	CD4p_CD25-_Il17-_PMAstim_Th
SE_18436	chr1:22369051-22370197	CD4p_CD25-_Il17-_PMAstim_Th
SE_20610	chr1:22363855-22368728	CD56
SE_22843	chr1:22365704-22368722	CD8_primiary

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I022037

chr1

22363852

22370535

Enhancer Sequence

ATACCCTGTC CTAGTGCTTG TTTTAATTAC TATTATTATT ATTATTATTT TGAGATGGAG 60
TCTCACTCTG TCACCCAGGC TGGAGTGCAG TGGCGCAATC TCGGCCCACT GCAACCTCCG 120
CCTCCCAGAT TCAAGTGATT CTCCTGCCTC AGCCTCCTGA GTAGCTGGGA CTATACAGGC 180
GCGTACCACC ACACCTGGCT AAATTTTTTT GTATTTTTAG GAGAGACGGT GTTTCACTAT 240
GTTGGCCAGG GTGGTCTCGA ACCCCTTACC TCAGGTGATC TGCCTGCCTC AGCCTCCCAA 300
AGTGCTGAGA TCACAGGTGT GAGCCAGCGC ACCCACCCAG CCTCGTTTTA ATTATTGTTT 360
GTCCCACTGG GAGTCCTTAA TTCCTTGAGT AGGGATTGGT CTTATGGTCT TATTGTATTT 420
CTTTTTTTTT TTTTTTTTTT GAGACGGAGT CTTGCTCTGT CGCCCAGGCT GGAGTGCAGT 480
GGTGCGATCT CGGCTCACTG CAAGCTCCGC CTCCTGGGTT CACGCCATTC TCCTGTCTCA 540
GCCTCCACAG CAGCTGGGAC 560