Tag | Content |
---|
EnhancerAtlas ID | HS150-01519 |
Organism | Homo sapiens |
Tissue/cell | NT2-D1 |
Coordinate | chr1:234879940-234880540 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:234880447-234880468 | TTTTTCTTTTTCTTTTTTTTT | + | 6.09 | IRF1 | MA0050.2 | chr1:234880431-234880452 | CATTTCTTTTTCTTTCTTTTT | + | 6.12 | IRF1 | MA0050.2 | chr1:234880437-234880458 | TTTTTCTTTCTTTTTCTTTTT | + | 7.26 |
|
| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_02487 | chr1:234879801-234880442 | Astrocytes | SE_03441 | chr1:234879137-234880436 | Brain_Angular_Gyrus | SE_04206 | chr1:234878839-234880625 | Brain_Anterior_Caudate | SE_05210 | chr1:234878806-234880467 | Brain_Cingulate_Gyrus | SE_06159 | chr1:234878714-234880868 | Brain_Hippocampus_Middle | SE_07154 | chr1:234878956-234880633 | Brain_Hippocampus_Middle_150 | SE_08108 | chr1:234878362-234880528 | Brain_Inferior_Temporal_Lobe | SE_38136 | chr1:234878598-234881939 | HUVEC | SE_45839 | chr1:234878982-234880519 | Osteoblasts | SE_47205 | chr1:234878039-234889090 | Panc1 | SE_61992 | chr1:234850904-234881356 | Toledo | SE_63435 | chr1:234845326-234887436 | NCI-H69 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I234743 | chr1 | 234878795 | 234883249 |
|
Enhancer Sequence | GAGTTGGATG CACAAAAGCA TTTTTCCCTT AATCTCATTA CAAGGGCTCC TCAGTCTTTA 60 ATTCTTCCCA GGGCTCACTT GCTGTGAAGT GATTTCCTCT TGGAATCCGT TTCTCTTTGT 120 GAAGCTGGGA GAGCAAGTCT GTTTGGTTTT GTAGGGATGT GGGGAAGGAA AGCAAAGACA 180 AAGGCAAAAA CAAGTGGTGC TGGGGTGCCC TGGAAGTTCC TAAGAGCAAA TGGACCCACT 240 CTGAAATGTC TGCAGCTGAG ACCAGTGATA CTCGAATTCC AGTTTGAATG AGGATCACGC 300 GCTGAGGTCA CGTACTTACT GCTGTCTCCT GTCTACCTGA GGTTTACAAA ATGTGTGAAT 360 AAAGGCGCCA GTGCTTTGAC AGCTGGTCTT GCTCATGCGT TTAGAGAGCA TCTTATTTCA 420 TCCTTTTTGC CCCTCGAATG TTGCGCATCT GACAGTTTGA CCACCCTGCC TGGACTCTTA 480 CATGCATGTG GCATTTCTTT TTCTTTCTTT TTCTTTTTCT TTTTTTTTTT TTTTGAGACA 540 GAGTCTCGCT CTGTCACCCA GGCTGGAGTG CAGTGGTGCG TCTCGGCTCA CTGAAAGCTC 600
|