Tag | Content |
---|
EnhancerAtlas ID | HS150-00195 |
Organism | Homo sapiens |
Tissue/cell | NT2-D1 |
Coordinate | chr1:33633470-33635650 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
LMX1B | MA0703.2 | chr1:33635310-33635321 | TTAATTAAAAT | - | 6.62 | NFAT5 | MA0606.1 | chr1:33635328-33635338 | AATGGAAAAT | - | 6.02 | NFATC1 | MA0624.1 | chr1:33635328-33635338 | AATGGAAAAT | - | 6.02 | NFATC3 | MA0625.1 | chr1:33635328-33635338 | AATGGAAAAT | - | 6.02 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_03557 | chr1:33634054-33635741 | Brain_Angular_Gyrus | SE_04534 | chr1:33633647-33638840 | Brain_Anterior_Caudate | SE_05102 | chr1:33632219-33639360 | Brain_Cingulate_Gyrus | SE_05995 | chr1:33632028-33640582 | Brain_Hippocampus_Middle | SE_07450 | chr1:33633708-33639290 | Brain_Hippocampus_Middle_150 | SE_08105 | chr1:33632466-33639677 | Brain_Inferior_Temporal_Lobe |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I033166 | chr1 | 33632029 | 33640582 |
|
Enhancer Sequence | TTCATTTAAA AAACATTTCT TGGGCAACTA TTATGTACCA GGCACTGTTG AGGCACTGGG 60 ATTATGGCGA AGGACAAGAC AGACACAGTC CCTGATCATA GGGACTAGTC TGGTGGGGAA 120 GACAGACAAC AAACAAGGAA AATAATAAAG GAGCGAGGTT ACCAATATGG TGTGTCCTGC 180 AGAGAAAATA AAGCAGTGTG AGATGGAGGG GACTTTAGGT AGGGTGGCCA GGGAAGGCTT 240 CTCTGAGGAG GTGACAGCAG AAGGATGAGG AGGAGCCAGC CATGAAAATG GGGGTAAGAT 300 AGAAAAATAC AAGCTGCTTG TTTTGAGAGC CCATGCTGAT GCAATTGTTG GAACTCTGGC 360 AGCCATCTCA GGCCATGAGG CAACTGTAAA GACCAAAGTC ACAAGCTGAA ACCAGAAGAG 420 TAGAAGGAAG AAGGAGCCCG AGTCCCTGAT GACTGTGGGG CTGCCACACC ATCGGTTTAC 480 TCAGTGACAT GCTAGGAAGC TGGCTGTCTG AGAAAAACTT TTTTTTTTAA ATCCCCAACA 540 GTGCCAATTT CCATGGTGTA AATGTTCCCA CTCAAGTGGA TTTCAAGCCA TCAGTGTGAA 600 GTAGTAGTTG GACTTGGCAT TGGGATGAGA TGCACACAAT CAGCTCTCAG GAGCCAGTGC 660 AACCTGCCGC AGCACACCCA CCTGGAGTCC TTTCCTAGAG ACTTGTCTTA CATGAGAGAG 720 AAACGCACCC CATCTGACTG CAGCTACTTC AGCCAGGGCT CTGTTACTAA CAGCTGAAAG 780 TCATTCCTAA CATTCGTGTG CAGCTTGAGC GGATACAGTC CTCGGAGCAG AGGAATCTTG 840 TTTGCCTAAG AGAGTAGAAA GACCGCTCCT CAGGTGCCTC TGACAGCCTT GGGCTATCCA 900 GCCTGGGACA CAGTGTGGCT GAGAGGCAGA TGTTGAGGAG ATGGGCCAAG TGCTACAATT 960 CTCCCCCTGG TGGCCCCCAT GGGTCCACAG AAGACCCAGC CACCCAGGCA GCTCTTCAGG 1020 ATTTCTGAGA AACTGCCTTG GAGTCTGCCT TCCTCACATT GCTCAGGGCA CTTGAGAAAC 1080 CTGGACATTT CCTCCCTGAT TTTGCAGTCA GGGAATAAGG ACAGCGGGCT TGCTCCTTCC 1140 TCCTGGATCC CGGGAGAATC AGAACACTCA TTTGCCCATT CCACAAACAT GTGTTGAGAC 1200 CTTGGGCCCC ACATGGTGCT GTGTCAAGGA TGGGGAGAGA TGAGGTGTGA GTCCTAAACG 1260 TGATGCCACG AGGTGTGCAT GTGTTGGGGT GACAGTCAGG GACACAGACA CTTACATCAT 1320 GGGGAATGCT GCGATCGTGT TAGGAGATCC CAAACTTGCT CCTCTCCCCA TATTCCCCAT 1380 CTCAGTGAAG TGCACCCCTC CCCTAACTCC ATCCCAGCCA GAAACCTCGG AGTGAGAGTC 1440 ATCCTTGATT CCTACCGCCT CCAAACCAAT CCAGTCACTA GGTTTGCTCT GGAATTTGTT 1500 CTCTCCTCTC TATGCGTGCT GCCTCTGGTT CGGTTTTTAT CACTTCTTTT CTGGGCTGTG 1560 GCCCCAGGCT CCTCCCTGCC TCTAGCTCTC CTGCTGCTCC AAGTGCCCTG CACAGCAGCT 1620 GCAGTGATTG TTCTAAAGGG CAGATGTATA AATGCTTCCC CCTCTCACTC TCCCCATTGT 1680 GCCAGTCTGC AGATTTCCAC ATTGTCTGGG AAGAAAGGCA CAAAGCCTTA GGGTGACATT 1740 CAAGGCTCTA CTGCTGGCCC CAACCTTTTC TTCTCCAGTC CTAGCTCTTG GTCCAGACGT 1800 GTGCTGTTCA ATACGACACA CGTGGCTATT TAAATTGCAA TTAATTAAAA TGAAATAAAA 1860 TGGAAAATTC AGCTCCTCGG TTGCACTGGC CACATTTCAA GTGCTTGCCA GCCACCTGGG 1920 CTGCTGTATC AGACAGTGCA GACACAGAAC TGCCCGTTCT ACCAGAGAGT TCTAGTGGAC 1980 AGTACTGCTG CAGACACACT GAGCAGCTCG CAGGGCTCTC CAGGCCTTTA CACATCTCTC 2040 AAGACCCAGA TCAAATGTCA CCTCCCCTGG GAGTACATGT CTCAAACTCT GCATGCACAG 2100 TGTCCCACAC TTGTACCCTG ATGGCACACA CTGCATTTTA ATTGCAAGGT TACCTGTCAA 2160 TCTCCCCTAC TAGGCCGGGC 2180
|