EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS148-01144

Organism

Homo sapiens

Tissue/cell

NHLF

Coordinate

chr1:161146410-161147210

Target genes

Number: 21
Name	Ensembl ID

TSTD1	ENSG00000215845
F11R	ENSG00000158769
USF1	ENSG00000158773
ARHGAP30	ENSG00000186517
RP11	ENSG00000228917
PVRL4	ENSG00000143217
KLHDC9	ENSG00000162755
NIT1	ENSG00000158793
PFDN2	ENSG00000143256
DEDD	ENSG00000158796
UFC1	ENSG00000143222
USP21	ENSG00000143258
PPOX	ENSG00000143224
B4GALT3	ENSG00000158850
NDUFS2	ENSG00000158864
ADAMTS4	ENSG00000158859
FCER1G	ENSG00000158869
TOMM40L	ENSG00000158882
NR1I3	ENSG00000143257
MPZ	ENSG00000158887
SDHC	ENSG00000143252

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr1:161146958-161146976	CCTAGAGGGGCGTGGTCC	-	6.57
KLF14	MA0740.1	chr1:161146961-161146975	AGAGGGGCGTGGTC	-	6.36
Klf12	MA0742.1	chr1:161146960-161146975	TAGAGGGGCGTGGTC	-	6.42
ZNF263	MA0528.1	chr1:161146481-161146502	GGAGGAGCAGGAGATGGTAGG	+	6.35

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_43832	chr1:161144728-161148303	MM1S
SE_68071	chr1:161122630-161173567	TC32
SE_68072	chr1:161122630-161173567	TC32
SE_68073	chr1:161122630-161173567	TC32
SE_68074	chr1:161122630-161173567	TC32
SE_68075	chr1:161122630-161173567	TC32
SE_68076	chr1:161122630-161173567	TC32
SE_68077	chr1:161122630-161173567	TC32
SE_68078	chr1:161122630-161173567	TC32
SE_68079	chr1:161122630-161173567	TC32

Enhancer Sequence

CCAGAGATCA GGATCAGGGT GAAGCTGGTT TCCCAGCAGG CGAAGTGAAG GAAAGTGGTT 60
GGAAAGGAAG AGGAGGAGCA GGAGATGGTA GGTCCCTCGC CTATCTCCCG TGCTACCCTG 120
GAATGATAAG TGTCAGGTTC ATACTTAACC ACCCCCGTAC CCCCACCCCA ACAGGACAGA 180
TTGGGGAGTG GGGACAGGAC AGCTAATGGA AACATTGTTT TCCCCCAGAC CAAGAACCAG 240
TTGAAGTGGC GACAGAGTCA TGACAGGACC GTGGAGTGGC CTAAGGAGTA CCCAGGGCGA 300
AGTAGGAAAC AGGCTCCTTC TATTCTTCAT GTGCCTGGGT GCCAACTCCT CAGGTGCAGG 360
GACCGTGACC ACCTGGGGGC TGTAAGCGAA CAGCCCCGGA GCTCGGCGGA GAGTAGGGTG 420
GGGGTGGCGT CCTCTACCTT TTCTACCTTT CCCCTCTTCT AGCGGGGGTG GGGAGGAGGG 480
TTACTGCTGA AGAGAAAGGG AGAGGGAGAG CAGGGGCAGA GACAGTCAGG GGTGGCTGGA 540
AGGGCTCACC TAGAGGGGCG TGGTCCGCGC TGTGGAGGGG GTTAAAACCC AGCTCTTTCG 600
GAGCACGCCC ATCCTATCCC AGTCTCTTGC TTTTGCCCTA CCTACTAGCA ACGTGAGCCC 660
GCCCGGCCCC CGTCCATACT TCCACCTAGG ACCCCGTCCC TGCTCAGGCT CGTCTCCAGG 720
CGTTACCCAA AACTTCTCAC TCTCTCGAAT GCCCAAACCT TTATCCCAGG CCTCCGTGTC 780
GACGCATTCC CAGCGCACAT 800