Tag | Content |
---|
EnhancerAtlas ID | HS148-00346 |
Organism | Homo sapiens |
Tissue/cell | NHLF |
Coordinate | chr1:39619310-39621570 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NKX2-3 | MA0672.1 | chr1:39621006-39621016 | TTCAAGTGGT | - | 6.02 | RARA | MA0729.1 | chr1:39621218-39621236 | GAGGTCTTAAGGTCATTT | + | 7.51 | Sox3 | MA0514.1 | chr1:39620169-39620179 | CCTTTGTTTT | + | 6.02 |
|
| Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
SE_00416 | chr1:39618666-39621629 | Adipose_Nuclei | SE_02052 | chr1:39619377-39620924 | Aorta | SE_14598 | chr1:39620404-39621417 | CD4_Memory_Primary_7pool | SE_25799 | chr1:39619385-39621571 | Duodenum_Smooth_Muscle | SE_32006 | chr1:39618455-39620905 | Gastric | SE_35822 | chr1:39618715-39621585 | HMEC | SE_36947 | chr1:39618590-39621552 | HSMMtube | SE_37973 | chr1:39615726-39621771 | HUVEC | SE_42256 | chr1:39618473-39621095 | Lung | SE_45768 | chr1:39619273-39621651 | Osteoblasts | SE_47164 | chr1:39617974-39621415 | Panc1 | SE_51765 | chr1:39619776-39621340 | Skeletal_Muscle_Myoblast | SE_53123 | chr1:39619602-39620989 | Small_Intestine | SE_54583 | chr1:39618652-39621626 | Stomach_Smooth_Muscle | SE_63563 | chr1:39619712-39621545 | HSMM | SE_64261 | chr1:39619201-39621429 | NHEK |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I039152 | chr1 | 39618537 | 39621579 |
|
Enhancer Sequence | GTACCCTTTT TGCCAGACCT ACACTTAATT TCCTTTAAAG CCTCACTTGG TCTTGCCATT 60 TCAGCCCTTT CCTTCGAAGT ATGAAGCCTG ACTTTTTTTG TCTTCCTTTC TTCAGCCCTG 120 CAGAGGCAGC TGTGGCCCTG GGGACAGCCC TTTCTTCAAA TGGCAAACTC ATTTTCTGTC 180 CAGCAGACCA GAAGGACAAG GTGTAATTCA ACGCTTCTCT CCACCAGACA CTGCTGCCAG 240 GGGGAGACAA TGAAGAAAGT GATCTTTGTT GCTCCCTGAA TAGGTCCCTG AACCTGGCAC 300 CTGCTTTTGT TACTGGCTCC TTAAGTCACT GGAGACATTT TTGCTGTTTC CTGGGTTAGC 360 AGCTGCTTTG GGATAATAGT AGCAACTGGT TGTCAGGATG TCAGTTCTGC CTCAAAGAAA 420 ATCAGTGTAT TTATATGAGG AGAGTTACCT TTTCTGTTCT TAAATTTCTT CAGGGTTTGT 480 CTGAAGAGTG AGCAGTTGGA AGTCAGCTGT GCCCTTAGTT TGATGACCCC ATGACCCTCA 540 TCTTTGAATC TGAGGAGACA CTGCCATTTC TACTATCCAA GTACTAACCA GGCCTGGCCC 600 TGCTCAGCTT CCAAAATCAG ACGAGATCAG GCGTGTTCAG GGTGGTATGG CCGTGGACGA 660 GACACTGCCA TATTTTTTTC GTCCTGCTCT CCCTCTGGTG AGACTCTGAG TTCTGGGTTC 720 TAGCATGTAG GTCAGTGCCT CCTACCTGGT AAGCATTCAA CAGATATATG TGGGATGAAT 780 GATTGAATGA ATTCCTTGAT CTTGCTGTCC AGGTTCAGTT TCTCTGACAC TGATACGTGG 840 GTGCTCTATG GGAGGGGGAC CTTTGTTTTT AGGAGAAAGA TTGCTTCAAA GGAATTATGG 900 AAGGTGTTGA TTTCTAGGGG GCTTTGGGGG AACTATGGGA ACTCTAAGAT ATGATTCGTT 960 CTCGCCTCAT TGGTCTAGAT CTTTCTCCTC GATAGTAACT GTCTGCTGAC AGACTTGCCC 1020 TGTTTCAGGA GCAGTATCCT GAACCTGACT CATCTGGGCT CTGTCCTTGA GCAGGGTAAG 1080 GGATTTTTTT TTTTTAACAG CCATCCTGTC ACTGTAGATT CAGAAGCCCT CAGGACCACA 1140 TCTCAGGCAC TGTAGTCTTG GACTTCCTGA TCTGGCTGCA TTCAGTCAAG TTCCACTCAG 1200 CTCTTAGGTG TCTGTGCCTT TGTAAGGGCT GTTGGAGACA GAAGGGCTTT TTTTCCGCTT 1260 TGTCAGCAGC TGGCCAGAGA ATGCCTATTA GTCTGCCAGA TCCTAAGTCT TTCACGTTTC 1320 CCTGTCTGTG TCTGGAACTT AGGGCAGAAT CTCTTACCAC CTGAGGTTAC ATCTCACTAT 1380 TTGCCTTTGT GGGACCCATT GGAGGATAAA AGATGAATAG CCATGAAAGG CATGCAGAGT 1440 TATTGAACTA TGGTTCTTTG AAATGCTGTG ACTCTGAGGA AAGATCCCTG GTCTCCAAGA 1500 ATACAACTGG AGCCAGACCA TTGCACCACC ACCCTCCTTT CCCAAGAGCC TCTTTGGAAC 1560 CATCACTCAT TCCATAGTTC CAAACATCCT TGTTTTTGTT TAATTTTTAT CTGATAAATG 1620 TTATGAAACA ATTTTAATGG TGAAACACAC AGAGGAAATG ACAAACTAGC ATGTGTTGTC 1680 TTTTAAATGC ACTTAGTTCA AGTGGTTAAG TCAGTTGTTC CTGTTGTTAG ATTGCTGTTG 1740 TGTAGTCGAC TTTCCTTCTT TAGGTGGGAA GAGTCTCTGA ATAGACTTTA AAAAAGCAAA 1800 AGGAACCAGC TCTTCTTTAG CTGATTGATC ATTCCTTTAC ATCTGACTCT TTTCAGCACT 1860 TAAATTCAGA TTGTACTATG CTGATTGCTT TCAGATCATG ACACAGAAGA GGTCTTAAGG 1920 TCATTTCAGG AGTTCTTTAG CTGAGGTCCA TGTGATACTT CTCCACTTGT AAACAAAAGT 1980 TTGTATGTAG GTAAATATGT ATATTTTTAT AGGGAAAAGT ATCCTTAGTT TTCATCAGAT 2040 TCTCACTGGA GTTTATGACC TAAAAATAGT TAAGACTTAG TATTTTATTT ATTTATTTAA 2100 GATGGAGTTT TGCTCTTGTT GCCCAGGCTG GAGTGCAATG GCACGATCTT GGCTCACTGC 2160 AACTTCCGCC TCCGGGTTTC AAGCAATTCT CCTGCCTCAG CCTCCCAAAT AGCTGGGATT 2220 ACAGGGGTCC ACCACCGTGC TCGGCTAATT GTTTTGTTTT 2260
|