EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS141-01293

Organism

Homo sapiens

Tissue/cell

NB4

Coordinate

chr1:161053100-161054160

Target genes

Number: 25
Name	Ensembl ID

RP11	ENSG00000232879
TSTD1	ENSG00000215845
F11R	ENSG00000158769
USF1	ENSG00000158773
ARHGAP30	ENSG00000186517
PVRL4	ENSG00000143217
KLHDC9	ENSG00000162755
NIT1	ENSG00000158793
PFDN2	ENSG00000143256
DEDD	ENSG00000158796
UFC1	ENSG00000143222
USP21	ENSG00000143258
PPOX	ENSG00000143224
B4GALT3	ENSG00000158850
NDUFS2	ENSG00000158864
ADAMTS4	ENSG00000158859
FCER1G	ENSG00000158869
APOA2	ENSG00000158874
TOMM40L	ENSG00000158882
NR1I3	ENSG00000143257
MPZ	ENSG00000158887
SDHC	ENSG00000143252
C1orf192	ENSG00000188931
RRM2P2	ENSG00000236484
FCGR2A	ENSG00000143226

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

JUN	MA0488.1	chr1:161053217-161053230	ATGATGATGTCAT	+	7.52
JUND(var.2)	MA0492.1	chr1:161053216-161053231	CATGATGATGTCATC	+	6.64
RARA(var.2)	MA0730.1	chr1:161053262-161053279	AGGTCACCTTGAGGGCA	+	6.23
ZNF263	MA0528.1	chr1:161053175-161053196	CTCCTCCTTCTCTCCTCCACC	-	6.01
ZNF263	MA0528.1	chr1:161053373-161053394	TGACCCTCCCACCCCTCCTCC	-	6.24

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_09434	chr1:161051914-161054700	CD14
SE_26861	chr1:161048709-161060403	Esophagus

Enhancer Sequence

GGGCCCTAGA ATCCCTGTCC TTGTCTAAAC AGACCCAGAA GTCCAGGTTT CCAGGCCAGG 60
GCAGGCCAGG ACTGCCTCCT CCTTCTCTCC TCCACCCAGT GTCAGCCTGG CGTCAGCATG 120
ATGATGTCAT CAGACCAAAG GAGACACATT GCCTGCCTGG TGAGGTCACC TTGAGGGCAT 180
GTGGTGGCCA GGCCAGGCCA AGCCCAGGGA CCCTTCTGTT GCAAATTGTT TACTGAGGCT 240
GGTGGACTCC GGCTGGTTAG ACACTCCTCC CTCTGACCCT CCCACCCCTC CTCCCTGGAG 300
TACCAGGACG CTGGTCAGGA GCCTTGGTGA CTCAGAAGCT GCCTCACAGC AGCAAGCCTA 360
GCCACAGCCA CCACCACCTT GCGCAAGGGA GAGAACAGGC CCAACTGGCC AGACGGGATC 420
CCTGCCCTTG GCCTCCCCCA CCCTGGCCAG GCCCCCACGG GCCTCTTTGG AGCCCAGCCC 480
TTTGTGTACC CCGCCCGCTC CCAGACAGGC CCTCCATTCC AGGTTTGGGC TGGCTGGCTC 540
TTCCCCACCC TATGCCTGGG TCTCAACTTT CCTTCCTATG TGAGCCTGGC CTCTGATCTC 600
AGGAGGGGAA ACTGAGGCTG GCACTTGCTG ACACCCAGCC ATCAAGAGCA TCTTTAAGGA 660
AGTATCTTTT CTTTATGAGG GGCCTTTCTC CATCAGTATC CCCTGCTGGG ACTTACAGAT 720
GTGAATGTAG GGGATCGTAG AGGTGGGTCT GTGAGAAGGA GGAAGGGAGT AAGTATGAGT 780
TTTTTGTGTA TGGGGAGCTG TGGCTGAGGG CCTGGCCAAT CTTAGTGCTG GTTCAAACGC 840
ATGTGAGGCT ATCTTCTTGC ATAAACTGGT GGGTGTTTGG CACATATATG TGTTCATGTC 900
TTATCTTAGG GGCATATACG TACTTACTTG TCTGTGTCCA GAGGGAAGAG CTGTGTATCA 960
GTATGTGTGA ATGTGTGTGC ACACATGATT CCGTGTGCAT GTCACACCCT CTGTATGCAT 1020
GGAGTGCATT CTTGTCTCGC GGAACTCTGC ACACATAGTA 1060