EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS141-00566

Organism

Homo sapiens

Tissue/cell

NB4

Coordinate

chr1:45149310-45151080

Target genes

Number: 20
Name	Ensembl ID

TMEM53	ENSG00000126106
C1orf228	ENSG00000198520
RNU5F	ENSG00000199377
RP4	ENSG00000259794
RNU5D	ENSG00000200169
KIF2C	ENSG00000142945
RPS8	ENSG00000142937
RP11	ENSG00000225721
SNORD46	ENSG00000200913
SNORD38A	ENSG00000202031
SNORD38B	ENSG00000207421
PLK3	ENSG00000173846
TCTEX1D4	ENSG00000188396
BTBD19	ENSG00000222009
RNU5E	ENSG00000202444
PTCH2	ENSG00000117425
RP5	ENSG00000226499
EIF2B3	ENSG00000070785
HECTD3	ENSG00000126107
UROD	ENSG00000126088

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr1:45149518-45149529	AAGAGGATTAA	+	6.14
EWSR1-FLI1	MA0149.1	chr1:45149760-45149778	TCTCCCTGCCTTCATTCC	-	6.14
EWSR1-FLI1	MA0149.1	chr1:45149764-45149782	CCTGCCTTCATTCCTTCT	-	6.94
SOX10	MA0442.2	chr1:45149527-45149538	AAAACAAAGAA	+	6.62

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I044683

chr1

45149532

45151101

Enhancer Sequence

TTATTGGTGA CACCTTGGAG CACAGAGGAG AACAGGATCC ATGCCCTTGG CTTAGTGGGG 60
AAAAACCTGG ACTTTGGAGT TATATGCAGA TCTAAGTTCA AATCCCATTC CCATCCCTAT 120
TTGAGACCTT CAATAAATGA GCAAACCCTT CTAAACCTTA GTTTCTTCAT CTGAAAGTTG 180
TGGATAATGA TGACCTCCTG AGGATCTTAA GAGGATTAAA ACAAAGAATT TAGGCAGGGT 240
GCGGTGGCTC ACACCTGTAA TTCCAGCACT TTGGGAGGCC AAGGTGGGAA GATAGCTTGA 300
GGCCAGGAGT TTGAGATCAG CCTAGGCAAC ACAGAGAGAC CCCATCTCTA TAAACAAAAA 360
CAACCACAGA GAGAGAGAGA GAGTGTGTGA GTGTGTGTGC GTATGGTGTG TGGATAGCTC 420
TTAATCAACA CTCAAAAAAT GTCAGTTTCT TCTCCCTGCC TTCATTCCTT CTGCCTTCAC 480
CAGGAAACAC AGCTAACATC ACTTTTTCCT TAGCGGTCAA CAAGCTTAGA TACAATTTAT 540
CCCAGCAACT GACTCTTGAA ATTGACACAT TTTGGTCTTT TTTCCACTGT TTTCATCTTA 600
TTAATTATTT TTAAAAATGG TAGTTAATGG GTCTTTTTTT ACCCTCATCA AGCTTACTAT 660
TAAAGAAAGG TTGAGATAAA TAATACATGA CTGGAGGCTC TTAATTAAAT ATACTTAATG 720
TCTTTTATCT CCCCCTACTT CTGAAAAACC TTAGTGACAT AACCCCGCTG AAGAAATATA 780
AAAAAGCATT CAGTCACAAA AGTTCATGGA AGGAGGCAAC AGGAGATGAA AGAATTCAAC 840
AAATATTTGG AAGGCAGAAG GCAGGTGCAG GGAGGCTAAC CGGCTTGAAG CAGAGGAAAT 900
TGCAAGCAAC TGCCAACAAG GGGAGCTTAC CAACAAGAAA CCAGTCAATT CAGCCAGTTT 960
GACCTCTAAG AGGCTTAATG CTTGAAAGCA CAAATTACCA CTGAAGGTCA GAAATGAGGT 1020
ATGGAGCCCA ACCTAGGGGG ATTCACTGAC CTCTGTGTGC AGAGCACTTG CCTGCACTCC 1080
AGACCCTCAA CCGCCAAGAA AGAAATGACT CTAAACTTTC TTGCTGCATG AAGAGGAAGG 1140
AAGTTGGACT CTGTAGGCCT CCTTGCACAG GGACCTCAGG CAGGGCTTGA AGGGCAGGAA 1200
TGAGACATAG AGTTGAAAAC TGATGAGTAG AGGGAAGGTC TACACACAGC ATTGTGTGAG 1260
CCCTTCCCCC ACCTGACTCC CAACATGCCA TGGCGAGGTG TCTGTAATAG CACCCCTGCT 1320
CTCTCACCCT CCCTGGGAAA GTAGGAAAGT CTTCTCCAGA GACCCTGATA TCTCTATGAG 1380
GGTGTTAAAA AAAAACAAAC AAGCTTCCAC TGACTGACAT TTATGAATTC CCCAGTGAGA 1440
AGACTAGTTG CCTAATAAAT ATCCAAACAC TGAAGGATAC AGTGATTTAA AGAGCCCACC 1500
AAGGGCCTAC TATAGTAAAT TAAAAAAGAC CTTCACCAAA GCATATCATT ATACAACTTC 1560
AGAAAGGTTT CAAAATCATC AGGAGTGAAA AAAATAGACA AAGGCACAGG AATCAGAATG 1620
ACTTCAGATT TCTCATCAGT AACAGCAACT GGGGAGGGTG AATCTGAGGG AAGCTTTTTT 1680
TTTTTTTCGA GACAGGGTCT TGCTGTGTTG CCCAGGCTGG AGTGCAGTGG CGGGATCATA 1740
GATCACTGCA GCCCCGACCT GGTCTCATTC 1770