| Tag | Content |
|---|
EnhancerAtlas ID | HS140-00101 |
Organism | Homo sapiens |
Tissue/cell | Namalwa |
Coordinate | chr1:40850300-40852520 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NR3C1 | MA0113.3 | chr1:40851491-40851508 | CAGTACATTTTGTTCTT | - | 6.13 | | NR3C2 | MA0727.1 | chr1:40851491-40851508 | CAGTACATTTTGTTCTT | - | 6.23 | | RFX2 | MA0600.2 | chr1:40852307-40852323 | TGTTGCCATAGGAACA | - | 6.04 | | RFX2 | MA0600.2 | chr1:40852307-40852323 | TGTTGCCATAGGAACA | + | 6.13 | | RFX5 | MA0510.2 | chr1:40852307-40852323 | TGTTGCCATAGGAACA | + | 6.28 | | RFX5 | MA0510.2 | chr1:40852307-40852323 | TGTTGCCATAGGAACA | - | 6.37 | | SPI1 | MA0080.4 | chr1:40851509-40851523 | AACTTCCTCTTTTC | - | 7.14 | | SPIC | MA0687.1 | chr1:40851509-40851523 | AACTTCCTCTTTTC | - | 6.31 | | ZNF263 | MA0528.1 | chr1:40850814-40850835 | TCCCCTTATCCCCCATCCTCC | - | 6.34 |
|
| | Number of super-enhancer constituents: 38 | ID | Coordinate | Tissue/cell |
| SE_03134 | chr1:40848785-40851034 | Bladder | | SE_03134 | chr1:40851099-40851484 | Bladder | | SE_03134 | chr1:40851511-40852921 | Bladder | | SE_03839 | chr1:40850611-40852546 | Brain_Angular_Gyrus | | SE_04329 | chr1:40846335-40853554 | Brain_Anterior_Caudate | | SE_08414 | chr1:40846289-40853002 | Brain_Inferior_Temporal_Lobe | | SE_09232 | chr1:40844996-40853879 | CD14 | | SE_10167 | chr1:40845196-40853865 | CD19_Primary | | SE_10889 | chr1:40837614-40877708 | CD20 | | SE_11872 | chr1:40845246-40853694 | CD3 | | SE_13110 | chr1:40848382-40853729 | CD34_Primary_RO01480 | | SE_13584 | chr1:40844944-40853555 | CD34_Primary_RO01536 | | SE_14445 | chr1:40838829-40853557 | CD4_Memory_Primary_7pool | | SE_15530 | chr1:40846294-40853798 | CD4_Memory_Primary_8pool | | SE_15973 | chr1:40845677-40853867 | CD4_Naive_Primary_7pool | | SE_16635 | chr1:40849445-40853784 | CD4_Naive_Primary_8pool | | SE_16957 | chr1:40846343-40853705 | CD4p_CD225int_CD127p_Tmem | | SE_17325 | chr1:40838557-40873402 | CD4p_CD25-_CD45RAp_Naive | | SE_17842 | chr1:40844625-40864199 | CD4p_CD25-_CD45ROp_Memory | | SE_18386 | chr1:40838397-40853796 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19424 | chr1:40846153-40853702 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20011 | chr1:40846373-40853881 | CD56 | | SE_20796 | chr1:40844923-40853882 | CD8_Memory_7pool | | SE_21559 | chr1:40846275-40853745 | CD8_Naive_7pool | | SE_21987 | chr1:40846094-40863432 | CD8_Naive_8pool | | SE_22383 | chr1:40844968-40853881 | CD8_primiary | | SE_26232 | chr1:40845639-40853557 | Duodenum_Smooth_Muscle | | SE_31081 | chr1:40846370-40853673 | Fetal_Thymus | | SE_32537 | chr1:40844774-40853751 | GM12878 | | SE_40132 | chr1:40846146-40852943 | K562 | | SE_43804 | chr1:40845348-40853547 | MM1S | | SE_50468 | chr1:40846794-40853665 | Sigmoid_Colon | | SE_53092 | chr1:40846833-40853666 | Small_Intestine | | SE_53508 | chr1:40846820-40854583 | Spleen | | SE_55131 | chr1:40846406-40853729 | Thymus | | SE_58445 | chr1:40828930-40871082 | Ly1 | | SE_59998 | chr1:40841808-40870673 | Ly4 | | SE_62202 | chr1:40838568-40871500 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | AGGCTGTTAC TTCCCACAGA GGCCACAGAT AAAGGACTCT CGTTGTTTGA GTGAAGTTAC 60
CAACTGTAAC AATTGCATAG GTTTCCTTGT TTCTTTCTTT TCTCCAAAAA ACTCATTTCC 120
TCTTGGCAGG TGTTACTATA ATTCACAGGT GTAATGAAAA TGTAATTTGG GATTTGAAAA 180
AGCATATCAG ACTGCTTCCC AGAGTACCAG TTCTTTTCAG CTGGTCCATT TCAACTTAAG 240
AGGTCCATCT ATGCATTTTT GAAGCTTCAT ATTTAATAAA TATAATATTT CACTGCTGTG 300
TTTGACTATT CCGTTTCCCA CACTTTCTCC TTCCCTACCC CACTCTTCTG GATCCTGTGT 360
TTCCCCACAG GCTTTGTGAA TGCCGGTCCA CTGATGGCTG AACTGCAGGT CTCTCCCCAG 420
TGGAAAGCCC CAGAGATGAG CCAGATCTGC CTCAGCTGTG GCCATCCGTC AGCGTAAGGT 480
TGCTCTGGTG GTCGTCTTCA GTTTGTCCAG CTCTTCCCCT TATCCCCCAT CCTCCCTCAT 540
GTGTGGCTGA AGCTTGCCCT GGAATCCCAC CTTTGTAGCA TGTCACTCGG TAGTAGTAGA 600
ATTTTATTAT TGTTGCTTTT TTTCATTTTC AATTAATGTT AAGTGATTCT CTGACAAATT 660
TTGTTGACCA TAGCCCTCTT TTCCCCTCAG TTCATAGATT TCCTATAGGA ATTCTGGTTT 720
GCTTTTAAAT ACATATAGAA TACAGTTTAT TTAAGTTCTG GATTTCATAA GCTTACTTGG 780
AAAATACTTT TTTAAAAAAA ACATTTCAGG TCAAAGCTTC CAAAAAGAAA TTTCTTAATC 840
TGAAACAATG AGAACTGGGT TCCTCAGGCC TCATGTCATT TCCCCTCACC CACAAATCAA 900
ATGTGTAATG CTCTCATTTT ATGATGTATT GAAACAGTGA AGCAAATGCG AGAGGGAGAG 960
AGACCTACTC TCAGCTGTAG CTGATAAGTG TGTCCTAGCA TGGTGATTTG AGCAAATAGA 1020
GCACCTTTTC TTTTCCTTTT CTTCAAATAG CCATGCTGTC TTTTGCAGCA GTTGCTGGTG 1080
ACGGAATACC ATAAATCCCC AGGCCTCTAC CACAGAGCTT ACATCTTTAG ATGTGGGTTT 1140
ACATGTTAAT CCTACAATGT TATTTCACCT CAGTGGTCTG AAGTGCGCAC ACAGTACATT 1200
TTGTTCTTTA ACTTCCTCTT TTCTTGTCTA ACTGGAAGTC CCCAAATGTG TGGATTTAGA 1260
AATGAGTTCT CTAGTGTTTC TAGTTTTGAG TTAAGGAAGT TTTGTCTTGA TATTGTTTAG 1320
GTGGTTGTTT TTGTTCTGTG CCTTCAAAAA TAATTTCTTA CAGAATTTTC TGTGTGAACT 1380
GGTGACATCA TATGCTGTAG TGTAAAGCTT GTAGAGAAGG GGGCATTGGT GTCTTTTTGT 1440
TGTTGTTGAC ACTTTATCAC TCCTTATAAC TGACACAAAC CCTGAGAAGA GAAACAGGAA 1500
GGAAACTCCC TGTTCTTACC ATGATGCTTT TGTTCAAAAT AGCTGAAAAC AGCAGAGCTG 1560
ACGGAAACCA ATTTGAGTGT GACAGCTGAT TTGAGAAAGA ATGAATTAAG AGATTCAGGC 1620
TCTTCTGCTA TGTTGAAATC ATTTTTACTG AAAGATTAGC TGTTTGGAAC AGGGATTGAC 1680
TTTGTCTCTC TGAAAGTAGG CATGAAGAGT TCGGTTAGAG GAACCGTTAC AGATGGAGGA 1740
GAAACTTGAG GAAAGGTCTT TCCTGTAGTG TGACTACAGT ATTAACATTC CCAGATTATA 1800
TGAAAGAGAA AGGAAGCTTC ATTAAATGAA ACATTGGAAT CAGGAAGACT CCGGCTTGGC 1860
TCCCTGAGCA TTCTAACTTG TTCTGAGCCT AGTCTCGACA GAAGTAGCCT GACACAAGTG 1920
GCTCAGATCA AGGGTCCATA TTACGGGCAG AGTAAAAATA GGTCCCAGTT TCATTAGACT 1980
TCTCATACAT TTAAGGAAAA AAAGATTTGT TGCCATAGGA ACAGACCAGT TGTTTTCTGT 2040
CTTGTGGGAT TTTAGGAGCT GGGGAGATAG GAGGATCCCT GTGCTTATAA TCTAAACATC 2100
AGTAAATGCT GGTTTTTTTT AAAACAACAA CAACTTTATC TTTTATGATT CTGAAACCTA 2160
TCCACGATAA AAATCATTGG AAAGTATGAA AAATATAATG ATGCTGAAGG TATTTTTCAT 2220
|
