Tag | Content |
---|
EnhancerAtlas ID | HS140-00049 |
Organism | Homo sapiens |
Tissue/cell | Namalwa |
Coordinate | chr1:23901430-23905780 |
Target genes | Number: 23 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Gata1 | MA0035.3 | chr1:23902982-23902993 | ACAGATAAGGA | - | 6.14 | HOXA13 | MA0650.2 | chr1:23905153-23905164 | GTTTTATTGGT | - | 6.32 | Nkx3-2 | MA0122.3 | chr1:23905146-23905159 | ATTAAGTGTTTTA | - | 6.16 | POU6F1 | MA0628.1 | chr1:23905444-23905454 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr1:23905444-23905454 | ATTAATTAAT | - | 6.02 |
|
| Number of super-enhancer constituents: 50 | ID | Coordinate | Tissue/cell |
SE_01721 | chr1:23900657-23905229 | Aorta | SE_01721 | chr1:23905312-23906115 | Aorta | SE_02313 | chr1:23901876-23905526 | Astrocytes | SE_02990 | chr1:23903287-23903795 | Bladder | SE_03649 | chr1:23903331-23903843 | Brain_Angular_Gyrus | SE_03649 | chr1:23903960-23904459 | Brain_Angular_Gyrus | SE_04396 | chr1:23902891-23904726 | Brain_Anterior_Caudate | SE_05716 | chr1:23903816-23905335 | Brain_Cingulate_Gyrus | SE_06239 | chr1:23900696-23905116 | Brain_Hippocampus_Middle | SE_07293 | chr1:23902637-23904795 | Brain_Hippocampus_Middle_150 | SE_08579 | chr1:23902794-23905344 | Brain_Inferior_Temporal_Lobe | SE_10300 | chr1:23899372-23906111 | CD19_Primary | SE_11050 | chr1:23898822-23908436 | CD20 | SE_18996 | chr1:23902922-23905455 | CD4p_CD25-_Il17-_PMAstim_Th | SE_26335 | chr1:23902515-23905797 | Duodenum_Smooth_Muscle | SE_27258 | chr1:23902880-23904675 | Esophagus | SE_27884 | chr1:23903017-23904621 | Fetal_Intestine | SE_28880 | chr1:23903194-23904813 | Fetal_Intestine_Large | SE_29676 | chr1:23901788-23905238 | Fetal_Muscle | SE_31953 | chr1:23902060-23902911 | Gastric | SE_31953 | chr1:23902935-23903813 | Gastric | SE_31953 | chr1:23903835-23904596 | Gastric | SE_34689 | chr1:23902272-23905407 | HeLa | SE_37153 | chr1:23901250-23906299 | HSMMtube | SE_38016 | chr1:23903113-23904896 | HUVEC | SE_38999 | chr1:23901867-23905446 | IMR90 | SE_41075 | chr1:23901556-23905295 | Left_Ventricle | SE_41075 | chr1:23905308-23906073 | Left_Ventricle | SE_42328 | chr1:23901634-23904721 | Lung | SE_42328 | chr1:23904726-23905233 | Lung | SE_42328 | chr1:23905280-23906072 | Lung | SE_44435 | chr1:23902863-23905477 | NHDF-Ad | SE_45797 | chr1:23901058-23906146 | Osteoblasts | SE_48755 | chr1:23901793-23902643 | Right_Atrium | SE_48755 | chr1:23902917-23904674 | Right_Atrium | SE_50077 | chr1:23902728-23906171 | Sigmoid_Colon | SE_51741 | chr1:23901781-23905632 | Skeletal_Muscle_Myoblast | SE_52549 | chr1:23902842-23905170 | Small_Intestine | SE_52549 | chr1:23905280-23906163 | Small_Intestine | SE_53706 | chr1:23901906-23902658 | Spleen | SE_53706 | chr1:23902697-23905306 | Spleen | SE_54840 | chr1:23900793-23905744 | Stomach_Smooth_Muscle | SE_55341 | chr1:23903829-23904379 | Thymus | SE_56054 | chr1:23901526-23905401 | u87 | SE_58372 | chr1:23873313-23964782 | Ly1 | SE_63528 | chr1:23901642-23905713 | HSMM | SE_68324 | chr1:23879596-23905390 | TC32 | SE_68325 | chr1:23879596-23905390 | TC32 | SE_68477 | chr1:23874949-23904689 | TC71 | SE_68478 | chr1:23874949-23904689 | TC71 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 23904600 | 23905142 | chr1 | 23903714 | 23904323 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I023572 | chr1 | 23899427 | 23906089 |
|
Enhancer Sequence | TGTGTCCTAA TCCCTATAAT TTGTGAATGT ACTGTTACAC GGCAAGTGGG AATTAAGTTT 60 GCAGATGGAA TGAAGGTTGC TATGCAGGAT TATCTAGGTG GGTCCAATGG AATCAGAAGG 120 GTCCTTAAAA GTGGGAGAGG GCAGCAGAAA AGAGTCAGAG AAAGAGAGGC AACCACGAAA 180 ACAGGGTCAG AGAGATGCCA TGTTGCTGGC TTTGAAAATG AAGGAAGGGG TCACAACCCA 240 AGGAATGTTG GCAGCCTCCA GAAGCTGGAA AAGGCAAGGA AATCAATTAT CTTCCAGATT 300 CTCCGAAAGG GAAGTCCCTG CAAACACCCT GATTTTAGCC CAGTGAGATC AGGTTGGTTT 360 GAGAGCATAA ACTTAAGTTG TTTTAAGTGA CTAAGTTTGT AGTCATTTTG TTATAGCAGC 420 AATAGAGAAG TAATACAGTT AATATGGGCC CTTGTAGGTC TCCAGGGATG GGGGAGTGGG 480 GCACAGCTGT GAGAGCTGTT GTAAGTGTGC AAGACTCATA GCTTAAAGAG CTCGGTAAAT 540 GGCCATGAAT GTTCTAATGA ATAGGCGTAG CAGGCGGGTT CTGGGCAGAG TAGAGATATG 600 GGTGACCCTT GCTTTGGTTT TTTCTCCCTC CACTCTTGTG ACACCCTCTG CCCAGTTTCC 660 TTCACAGCCC TGGGGCTTGC TGAGAGAGCC GGGCTGATAT GTCAGGCCTT CAGCATTGAG 720 TAGGGCAATC ACTTAGCAAG TTGGCAGGTC TCAGCAGCTG GTGGAGGAAT CTGGGCTCTG 780 ACTGAGGACA GGATTAGAGG TCAAAGTGGG AAAGTAGGGA ATAGGCCCCA GACTGAGTAA 840 AAAGACCAGG AGAGCTGAAG GTGGGGGAGG GTCAGGAGCA GGTTCTGAAA GGGGGTGCAA 900 AGCTAGGCAG GGCCCAGACT TGAGGCCTGT TCTAGGTGGT GCTGGCTGGT AGGGGAATGA 960 CTGATGGTCT AGGATTGCTG AGGACAACTG TGCACCTGCC AGCACTGTCC TAAGCCTGCC 1020 TCTGAACACT AAGCTGTCAG CCTCTGTTTA CCTTCCACTC TCAGTATAAC CTGCATTCGG 1080 CCTATTTGTT GGGAGGCAAC TGAAAAACTA ATTTATCCTG AATTATTCTT AGTGACTGAT 1140 AGTGGCTTAC TGTGTCAGAT ACTTGCCAAG GAGATTCATG TTGAAGTGCA TATCATTTTA 1200 ACCTAAAAAG ATGAAGTGCA TTTAAGGTAG CAGTGTCTGA GAAGGAAAAC CTCATGGCTA 1260 CTGGTGGTGG GGGGTGGCAG GGAACATAGG ATGTCACACG GTGGACAGCC TTACCTGCTC 1320 ACAGGGCTGT ACACCCCCAG GAGGTCTCTC ATATTCCAGC CCCCATGTCC TTAAGTCTCT 1380 TTAGATTTTT TTCACCTGGG CTTTCATTAC AATTCTTTTA CTTTCCGTGT TTCCTGGGTA 1440 AGCTTGTTTA TATATTTTTA GCAAACATTC ATGTAACACT ATGTGCCAGG CACCATTCTA 1500 AGTGCTTTAC AAATGTTTAT TTAGGTAACA GAGGTACTGT TGCCTCCATT TTACAGATAA 1560 GGAAACTGAG ACACAGAGAG GCTAATTTGC CCAAGACCAC GTGGCTAGCG AGTGGCTACA 1620 CTTTCTGAGC CTCGGCTTTC TTGGCTGTTA AATTGATATG TATATACAAG CGCCCTCTGC 1680 ATAGCAGGGC TTCTCAGACC CAACACTATT GACATTTTGG GCTGGATAAT TCTTTGTTGT 1740 GAGGCTGTCC TGTGCATTGC AGGATGTTTA GCGGTATCCC TGGCCTCTAC CACATAGGGT 1800 ATTCACTGCC AAGAGATGCC AGTAGCAACT CCCACTCAAG CTGTGACAAA CCTAAAATGT 1860 CCCCTGATCT TGCCAAATGT CCTCTGGGGG CAAAATCAAC CCTAGTTTAG AACCACTGCC 1920 TAATAGGATC CTGGGGAGGA TTAAATGAGC TATTTCATAT AAAATACCTT CCGGCAATCC 1980 CTTCCCCATT CCTTCCATAA CTCTATGGTG AGTTCTAACT CCTCAGAACC CTCTTGTTCT 2040 TTCTGTTCCT CTACTGTTTG GAAAATGTGC CCACCTATGG AGACTGGGTG CTTGAGAGCT 2100 TCTTGCAAAT CCAAAGCTGT TCCAGGAGCT AGACCTGATT CCAGTCCTGT CATTTCCACA 2160 GACATGCTGT GGGACCTTGG CTGAAGTCCT TCCCCTCCTT GAGCCTCGGT TTCCCCATGT 2220 GTACGAGGGG GCTGACCCAG AAGCTTTCCG AAAGGTCTTC TCACTGCAGG AATCAGTGAC 2280 TGGGTGATTC ATACCAAGTG CAAATTCCCC TCACAAAGTC CAAATTCTTC CAGCGACTTA 2340 GTCATTCCAG GGTTTGAACT TTCTCGCAAA AACCATTTGA AAAATTCTTC CAGCTTAAAA 2400 AAAAAAAAAA AAAGCTATTA AAAGAAAGTA AAAGTTTCAA AACCAAATCC TAGGCAAACA 2460 ACCCTGAAAA CAATACACAC ACATACATAT ACATACAGCA CCCAAGGTAG CTCTGAGAAC 2520 AGGATATGAA ACCTTGCAGG CCGGCACTAA GAAATGATTC ACAGGCCTTT GAGATGCTTC 2580 TATTTCAAGA CACAGTCCAC CCACTGGATC TGGTGGCTCC AAAAACAAAC TTTCAGCTGC 2640 TGTTTCTTAT CGCAGTGTGG TTCGCCTGGC CAGTATCCTT GGGTCTCAAG AGCTCCAGAC 2700 AGAAGACAAG GTTGAGTCCT GTGAATTCCC TTTCTGTTCT ATTTCAAGCC TCAAGCTGCT 2760 GGCTTGTTTA AAGAAAGTCT TTTGCATCCA CCTTTTGGTT GGCTGACCCG AGTTTAAAGC 2820 AACATAGCCT AATGGGTTCG TAGCACAGCC TGCGAATTCA TAATTTTAGT TTAGCAAGGC 2880 CTCTGTGTGG CTCCAGCAAG TCCTACTGGA TCCTGGGCTG GTCATTCTAG AAGCTGTCTC 2940 CAGCTAAACA ATCCTGCCTG GCTTTCCTTA TACATATCAA TATTATACTT GCCCTAGGCC 3000 AGGATTAAGA ATTTTAGCAC AAATTCAAAA TTTCATGCTT TTATGTAAAA TAGAAATATA 3060 AAAGTAATTC ATTCGATGAA ATGCTTACTG AGTGCTCACT ATATGCCAAG CACCAGCAAT 3120 GTACTGGCGA TAAAATACAG CCCCTGCCTT CAGGAGCCAC ATTGAACAGG AAAAGCAGAC 3180 AATCTAAATA TACATAGTAG AAACACATGG AACTATTCCC TATGGGAAAT GCCCTGCATA 3240 AAAAGTGATA CCAAAGTTGG AGCAAAATTG AAAGAAATGC AAATGCTTGT GATACGGTTA 3300 AGTACATTTT CATCTGTACT TACCCTTGAT TTTGTTTTAG ATTTAGAAAA TCTTGAACTT 3360 TCACTGTTGC TTCATTTGCC CTCCAAAAAT CCAGAATCTT ACAGAAAGGG TCAGTGTCTG 3420 GATCAAACAT GTTTCTTATC TAATTTCCTT GCCCCAGTTT TTGTTTATGC CATCATTGCT 3480 GCATGGAGTC CTCCCTCCTC TCCTTGTGTA TCCTCCAAGT TCTGATGCAA AGCCCACTTC 3540 CTCCAGGAAG CATTCGCAGA CCCATCTGGC CACATCCTCG CTGTTCTCTA AACACACATA 3600 TCTCATGCTC TTGACTTGGC CTTTAGCCTG TCCTGCCTTA TGATCTCTCT TGTACTTCTG 3660 TCCTGAAGTT TTATCTAACT TATGAATTGG GGGAAAGAGG ACAGGCACTG ACATTTATTA 3720 AGTGTTTTAT TGGTGACGGG CATTTTGCTA GCTCTTTACT GTATATAATG TGCCTGGTAT 3780 GTAGAAGATG TTCAATAAAT ATTTGTTCAA CGAATGCTTC AGTGATTTGG CTTAAACCTA 3840 ACAATAACCC TATGAGACCA ATTCTATTAG TATTCCCATT TTACAGATAA GAGAACTGAG 3900 GCACAGACAG GTAAAGTCTG CATTTGAGGG CTTTCTGTCT TAAAAGTTGA AGTTCAGACT 3960 TTCTCTTCTT CTCTGTTGCT TTTTTCTGCA AATAGATTTC CCTGAAGTGT CTTGATTAAT 4020 TAATAGGACA TATACTGTGC TCCCTGCTTT ATCCCATCTC AGGCAATATT ACCTGTTCTC 4080 TCCGTTGTGA GCCCATATTT GTATTTCTAC AGTTAGTTTA GAAACCACTC TGCATCAGGC 4140 GTGGTGACTC ACGCCTATAG TCCCAACACT TTGGGGAGGC TGAGGCGGGT AGATTGCTTG 4200 AACTCAGGAG TTCGACATCA GCCTGAGCAA CATGGCAAAA CCCCATCTCT ACAAAAAAAT 4260 GAAAAATTAG CCAGGCCTGG TAGTGCACAT CTGTGGTCTC AGCTACTGGG GAGGCTGAGG 4320 TGGGAGGATC ATTTGAGCCC AAAAGGTGGA 4350
|