EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS139-03285

Organism

Homo sapiens

Tissue/cell

Myotube

Coordinate

chr1:153536850-153537980

Target genes

Number: 16
Name	Ensembl ID

AL591704.5	ENSG00000237008
BX470102.3	ENSG00000238279
S100A6	ENSG00000197956
S100A5	ENSG00000196420
S100A3	ENSG00000188015
S100A4	ENSG00000196154
S100A2	ENSG00000196754
S100A16	ENSG00000188643
S100A14	ENSG00000189334
S100A1	ENSG00000160678
CHTOP	ENSG00000160679
S100A13	ENSG00000189171
SNAPIN	ENSG00000143553
ILF2	ENSG00000143621
INTS3	ENSG00000143624
SLC27A3	ENSG00000143554

dbSUPER

Number of super-enhancer constituents: 16
ID	Coordinate	Tissue/cell

SE_02493	chr1:153537674-153541738	Astrocytes
SE_27045	chr1:153535708-153541871	Esophagus
SE_34145	chr1:153536228-153537636	HCC1954
SE_34145	chr1:153537681-153541855	HCC1954
SE_34451	chr1:153535867-153542547	HCT-116
SE_34737	chr1:153535871-153542493	HeLa
SE_36040	chr1:153533581-153542335	HMEC
SE_38789	chr1:153537428-153542142	HUVEC
SE_43349	chr1:153537691-153541885	Lung
SE_45223	chr1:153537727-153541828	NHLF
SE_57543	chr1:153536800-153537511	VACO_503
SE_57543	chr1:153537787-153541191	VACO_503
SE_58034	chr1:153537814-153539879	VACO_9m
SE_63967	chr1:153537683-153541425	HSMM
SE_64375	chr1:153535710-153541858	NHEK
SE_68094	chr1:153505033-153542157	TC32

Enhancer Sequence

CAGAGGCATC TCTCTCTGCC ATCTAACTGG AAGCTCCCTT GGGCAGGAGT GTTTCCTCTC 60
TCAGACTAGG AGCTCCCAGA GGGTGGGGAA TGTGTCTCCC CTCACCCTGA AGGCCCCTGA 120
GCCTCTAGGC AGACAGGGGC ATGGATAGGG TGGGGGCAAC TTAACATTCT CTCCACCAGG 180
AAGGATCCTG TTGGAATTAG AATTAAAGAT ATGAAATGTT CATTGCCTTG GGATCAGGAT 240
GGGACAGACC TCAGCGGCAA GGCCTCTGAG AATACTCAGA CCAGCCTGGA AAGGTTAGGC 300
AGGTTTCAGG GTGAGGCCAG AGGAGCTATG CCAGAGGCAG GGCATGCCCT GGGCCCATCA 360
TGCCAGCCCT GCCTTCACCG AGGCAGGGGG CAGAGCTTTG CTGCTTGGGG CCATGACCCA 420
GGCAGAGTCT TGAGACCCCT GCCTCTTGCA CCTTAGTCCT GCTAGAATCC AGGACTTTGC 480
AAAAAAAAAA AAAAATCTCA GGATTCTTTT TGCAGCAACG CCCACATGCA CACCTCCTGC 540
TCCTAGGCCT AGACCCCCAA AGAAGGGCCC CTAGACTGAG ATATCCAGGG GAGGGCCTCA 600
GAGCAACCCC TGCACTGAGA CCTCACAGAG GAACCTGGAG AAAAACCCTT CAGTCGGCCG 660
GGCGCGGTGG CTTACTCCTG TAATCCCAGC ACTTTGGGAG GCCGAGATGG GTGGATCACG 720
AGATCAGGAG ATCGAGACCA TCCTGGCTAA CATGGTGAAA CCCCATCTCT ACTAAAAATA 780
CAAAAAAATT AGCCGGGCAT GGTGGTGGGC GCCTGCAGTC CCAGCTACTC GGGAGGCTGA 840
GGCAGGAGAA TGGCGTGAAC CTGGGAGGGG GAGTTTGCAG TGAGCTGAGA TCACACCACT 900
GTACTCCAGC CTGGGCGACA GAGCGAGACT CCATCTCAAA AAAAAAAAAA AAAAAAAAAA 960
ACCCTTCAGT CAACACTTCA GCACTTCACA GAGAGTTCTT CCAAGGGGGA AGGCCCAGAG 1020
AGGCCCAGGT TGATCCCACC AGGGAAGCTG GAATGAGAGA ACTGTGGAGA CAAAGACAGA 1080
GACCCACGGG GATCCTCCCC ACCCTGCCCT CAGCAGGACA GAGGTACTCA 1130