| Tag | Content |
|---|
EnhancerAtlas ID | HS139-00635 |
Organism | Homo sapiens |
Tissue/cell | Myotube |
Coordinate | chr1:19831310-19832820 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:19832048-19832069 | AAAGAGAAAGTGAAGCCAAAA | - | 6.39 | | RARA | MA0729.1 | chr1:19831721-19831739 | GAGGTGAAAAAGTCATGT | + | 6.64 | | RORA | MA0071.1 | chr1:19832254-19832264 | TGACCTTGAT | - | 6.02 | | RUNX1 | MA0002.2 | chr1:19831624-19831635 | CTCTGTGGTTT | + | 6.14 | | Sox6 | MA0515.1 | chr1:19832065-19832075 | AAAACAATGG | - | 6.02 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_00361 | chr1:19830861-19833107 | Adipose_Nuclei | | SE_25786 | chr1:19830679-19834334 | Duodenum_Smooth_Muscle | | SE_26537 | chr1:19831334-19833465 | Esophagus | | SE_29645 | chr1:19830730-19833010 | Fetal_Muscle | | SE_31447 | chr1:19831929-19832868 | Gastric | | SE_41031 | chr1:19830679-19834560 | Left_Ventricle | | SE_42185 | chr1:19830660-19833467 | Lung | | SE_48688 | chr1:19830682-19833436 | Right_Atrium | | SE_50058 | chr1:19831328-19834390 | Sigmoid_Colon | | SE_51211 | chr1:19830717-19833619 | Skeletal_Muscle | | SE_52345 | chr1:19831290-19834456 | Small_Intestine | | SE_53453 | chr1:19831280-19833158 | Spleen |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I019504 | chr1 | 19830895 | 19834322 |
|
Enhancer Sequence | ATGCTATAAT AAAGGCTTTG GGCCAAGTTG ACAATTATGA GCAAAAAAAA AAAAAAAAAA 60
AAACAAAATC AAGAAGATAA GTGTTTGCTA AAGGCTCACC CTACGCCAGC TGTGTTTATT 120
TGTTGAACTC TATCACCATG TTCCTTGGCC CAAACACTGA AGGTCCTTTA GATTCTTAGT 180
TTATTTAGTG CCTCTTTCAA CACTCTAGTA CTTTGACCCC AGTCTTATCT GAAGGAAAGA 240
GGATTTCTGG TAAATAGTTT CCAATTTGGA AACTCAACCC AAGCACTTCC ATCCCTCATC 300
CCAGTGTGGA CCACCTCTGT GGTTTTAACT GCTGGGGATG AGTCAGAAAG TGATGCTGGC 360
TGAGTTGGAA CTGAGAACTG TAATGCTTAT AAGAAATAAT AGAGAAGGTT TGAGGTGAAA 420
AAGTCATGTT CCGAGGTACA AAGGAAAAAC CAATAACAAC CCAGAGTTTG GAGTTTCATT 480
CTGCCCTGCT CTGATAATAT CACTATGGTG ATGTTCTCCA TAAACAATTG CAAAATAGCA 540
AGATGAAAAG GAACAAGCAA GTTCCACCCA GGCGATCTGG AGTTATTTTA GGGATCAAGG 600
CAGTGTCATC TGGGGTAAAT ATGGAATGCA AAATCTGTTC TTGTAATAAT CATCCCCTTC 660
TTTTGTGAGG CTGAACAAAG ACCTGGCAAA TCAGTCGTTT TGTGCTCAAA GAAGCACTGA 720
CCCAGTGTTC TCAGGGCCAA AGAGAAAGTG AAGCCAAAAC AATGGAAATG ATGGTTAATA 780
ACAGATGCTG GAATTATTCT TCTCACACCC ATGGACTCTG AGACTCCACT GAGCCTGGTG 840
TGGAGTCCAA GCGGGTGGAA CAACGGTGAT GTTCTTGGGT AGGGTTGGCC CAGTTGAGAG 900
GCTGGGATCG GGACCCCAGG TTGCTGAGCT CGGTTGCCTG CCCTTGACCT TGATTCTTGG 960
GCCAGAGTCG GTGGAGGGAA GCATCTTCAA GGCCACGGTC TGTCTCTGGG GCATCACCAT 1020
CTGCTGCAGA TGACATTTAC TGCTCCTATC CTCATGCTAT TCTCTTTGAA CCCCTGACTC 1080
AGCGAGCCCC AGTCCAAAAA GCAGAACTAG CTATTTTTTG CATCAAGAAA AAGATGTCAG 1140
GCAATACACT TGCCGAATTC TTTGCTGACC CTGAAACGCT TCCTCTTTGC ACTTAACTCC 1200
TGTTCTTCCT TTATTCTCTT TGCTGCCTTC TCTTCTAGAC CACTAAATTG CAAGCGCCGC 1260
TATCTTCTCC AATGAAGATG CTCAAGGGAA GGGCTGTACT CAGCCATGGA GGCTGGCACA 1320
GTGCCTGGGG CACGCAAGTT TCTCCATAAA TGTCAGCTCA TAGGAGGTGA ATTCAAAATC 1380
CCATGCCTAC CCTAAAATGG ACATTTCTCC GGCAGATCTG AGACTGAGGC TATTTGTTCA 1440
TTCATTCAAC AAATATTTAT TGAGCACCTA CTAGAAACCA GAATTTGTGC TAGGGACTGG 1500
AGCTGTAAGG 1510
|
