Tag | Content |
---|
EnhancerAtlas ID | HS138-03183 |
Organism | Homo sapiens |
Tissue/cell | MSC_BM |
Coordinate | chr1:202003330-202005650 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CREB1 | MA0018.3 | chr1:202004082-202004094 | GGTGACGTCAGC | + | 6.14 | CREB1 | MA0018.3 | chr1:202004082-202004094 | GGTGACGTCAGC | - | 6.14 | IRF1 | MA0050.2 | chr1:202005141-202005162 | GTTTCCTTTTACTTTTCTTTT | + | 6.23 | IRF1 | MA0050.2 | chr1:202005162-202005183 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 | NFAT5 | MA0606.1 | chr1:202004430-202004440 | ATTTTCCATT | + | 6.02 | NFATC1 | MA0624.1 | chr1:202004430-202004440 | ATTTTCCATT | + | 6.02 | NFATC3 | MA0625.1 | chr1:202004430-202004440 | ATTTTCCATT | + | 6.02 |
|
| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_23058 | chr1:202003070-202004639 | Colon_Crypt_1 | SE_23723 | chr1:202003133-202004433 | Colon_Crypt_2 | SE_24689 | chr1:202003019-202005179 | Colon_Crypt_3 | SE_25977 | chr1:202003098-202005224 | Duodenum_Smooth_Muscle | SE_26730 | chr1:202003201-202004852 | Esophagus | SE_27624 | chr1:202002753-202007729 | Fetal_Intestine | SE_28545 | chr1:202002635-202005490 | Fetal_Intestine_Large | SE_31432 | chr1:202003030-202004833 | Gastric | SE_31432 | chr1:202005212-202005566 | Gastric | SE_33417 | chr1:202002752-202008344 | H2171 | SE_33792 | chr1:202002877-202005297 | HCC1954 | SE_34304 | chr1:202003057-202005125 | HCT-116 | SE_34741 | chr1:202002989-202005297 | HeLa | SE_41626 | chr1:202003359-202004353 | LNCaP | SE_43434 | chr1:202002760-202004009 | MCF-7 | SE_43434 | chr1:202004034-202004676 | MCF-7 | SE_50066 | chr1:202002922-202004883 | Sigmoid_Colon | SE_52354 | chr1:202003018-202004869 | Small_Intestine | SE_56834 | chr1:202002917-202004651 | VACO_400 | SE_57376 | chr1:202003233-202004124 | VACO_503 | SE_57376 | chr1:202004143-202004423 | VACO_503 | SE_57945 | chr1:202003251-202004112 | VACO_9m | SE_57945 | chr1:202004146-202004634 | VACO_9m | SE_65333 | chr1:202002930-202005541 | Pancreatic_islets | SE_67013 | chr1:202002752-202008344 | H2171 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I202033 | chr1 | 202002815 | 202007566 |
|
Enhancer Sequence | GAAGGAGGAG GATATGAGAT GCCAGACGGG GGAGGGTGGG GGGGACAGGT CCCAGAAGAG 60 GTCAGCTGGG ACCCAGGCAG GATGGCATTG TGGCTGCGGG TGCCAGAGTC AGCCTGCCTG 120 GGTTAAGGTC CTCAGTCAGC CTTGACTGCT GGGTAATCCG TGGTAAGTAC CCACTGCTCC 180 TGCCTCAGCT TCCCCACCTC TCACATGTGG TTGATCCTCA CAGCCATCTC TTGGGGTTGT 240 TCTGAAGATG AAATGAGATC ATCTATGTAA GAAGCTGGCA CTTAAAAGCA CAGAGAGGGC 300 ACCAAGGAAC GTATGGTCTG TCCTTATTTG GGGAATGGGG GTGGAAGGCG CCCAGCAGGG 360 CATGGGGCGT GGTATGGCAG AGCCAGGACT AAGGGTCTGT AGCCTCCTAA ATCAGGGCTT 420 TCTCCGCAGG ATTTCCCATG TTCTCACCAT CTACAGAGTC ACTCCCCTCC ACCCTGCTGC 480 CCCGTTCCAC CAAGTGGCCC TCACACTAGG TGGAGGAGCC CTCACAGATC TCTTTCCTTC 540 AGCCTGCCGT TCTTTCTGCA GCACCAGGGC CCTGGGACCA GCTGGTGGTT TCCACCAGAG 600 CAGCCTCGGG GTGAATTTAG TCAGGAATGT GCCCTCAGCT CAAGAGAACC CTCCCCAACC 660 TTCCACTCCC CATACCCACC CCCGACCGCA GGTTCCCCAC CCACCCGTGG CCTGGCCAGC 720 AGCAACCTCC ACTAGCTCGC TAGCTCAGTG ACGGTGACGT CAGCCCTGCA GTGCAGGCTG 780 GGCTGGTTTA CCCGCAAGTT TCACCTCTCC CTGGGGAGAC TGGATTACCT CACCCTGGGA 840 GCAGAGTGAA TGATTAACCA GCTTCATCCT GGAGGGCCTC AAAGGCCCGT CCTGGGGTGT 900 AGGCCTACAG GGCAAGGGGC TGCATGGTCA CATACCCTAG TATGCGGGTT CACATACCCC 960 AGCCGGGGCT GGGGTATGTG ACCGCCCCGT CCTTGGCCAC TGCCCTCTTA TCTGCATCAC 1020 TGCTCACAAG TGTCATAAAA ATTTGTCTAC AGCATATATA AATATACATA TGACGTGGAA 1080 GGCTTCCGAT GGCAAATAAC ATTTTCCATT TTGCCTAAGC TTGGGTGGCT TTTTATTCAT 1140 CTATTGTTGT TTTAAGTACA CATTTCCATC TAAACTTAGA TGTATGTTTA GGCTGGCCGC 1200 GGTGGCTCAT TGCCTGTAAT CCCAGTACCT TTTAGGGGGT TGAGGCGGGT GGATCATTTG 1260 AGGCCAGCAG TTCAAGACCA GCCTGGCCAA CATGATGAAA CCTCGTCTCT ACTAAAAAAT 1320 ACAAAAATTA GCTGGGTGTG GTGGCAGGCG TCTGTAATCT CAGCTACTCG GGAGGCTGAG 1380 GCAGGAGAAT CACTTGAACC TGGGAGGCGG AGGCTGCAGT GAGCTGAGAT TGCACCATTG 1440 CACTCCAGCC TGGGCAACAG AGTGACATTC TGTCTCAAAA ACAAAAACAA AAACAAAACA 1500 AAAAAAATAA ACTTAGATGT ATATTTAAAA ATTGCTTTTT ACCCCTGAAG GTCTCAGCAT 1560 CCTACCTGCT CTATTCATTA GTGTTTAGAT TACCCATGAC ACCAGAAGGA CTTCCCAACC 1620 CAGAAAAAGA TCCAGGAGTT GATATAAAAT ATAGAACTAC TATAATATTA GCAACTTGGA 1680 GCAGCAAGTT CTTGACTTGG GAAAGTAGGA ATTCCTCTCA TTAAGAGATG TTTGCCCACA 1740 GGGAATGCTG CATAGAAAAG AATTTGGCTG GAACTCTTTT TTTCCACTAT GACTCCATTC 1800 ACACTTGAAT TGTTTCCTTT TACTTTTCTT TTTCTTTCTT TCTTTTTTTT TTTTTTTTTT 1860 GAGACAGAGT CTCGCTCTGT CACCCAGGCT GGAGTGCAGT GGCATGATCT CAGCTCACTG 1920 CAACCTCCGC CTCTCAGGTT TAAGCGATTC TCCTGCCTCA GCCTCCAGAG TAGCTGGGAT 1980 TACAGGCGCG CACCACCATG CCCGGCTAAT TTTCACATTT TTAATAGAGA TGGGGTTTTG 2040 CCATGTTGGC CAGGCTGGTT TTGAACTGCT GACTTCAACT GATCCACCTG TCTGGGTCTC 2100 CCAAAGTGCT GGGATTACAG GCGTGAACAC AGCATGTTTC CGTTTTCAAA ATAAGATATG 2160 TCCTAATTGC TGTGAATTTT TAAAAGAGAA TTATTTTCCA TGACACATTC TGTTTTCAGA 2220 TGTACTGACT TTAGGAGTTG GTAAATAGTC CTCTAGCAAT GCAAATGCAA ATTATATATT 2280 AAAATATGAA TTTTTTTCTC CAGAAACATC ACAAGATTCT 2320
|