EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS138-00056

Organism

Homo sapiens

Tissue/cell

MSC_BM

Coordinate

chr1:7341580-7342650

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx3-2

MA0122.3

chr1:7341773-7341786

ATTAAGTGGTTTT

7.22

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_52077	chr1:7341562-7343083	Skeletal_Muscle_Myoblast
SE_55819	chr1:7340756-7343231	u87
SE_63862	chr1:7341562-7343153	HSMM

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I007281

chr1

7341650

7342998

Enhancer Sequence

ACTTGAAAAC GAGCATGTTC TTAAATGAAA GAATTAATCA TGCTAAATTA GAAAAAGTAT 60
TAAAATAGTT TTAGATTAAT GCAGACTGTG AGTATCAATA TAATTGCAGC AGCTTAATTT 120
GGCATAAAAA GCATCTAATG AAATATTTTA ATATCACTGT CCATTCAATT TACCAGCTTG 180
AATTTCACGG GGTATTAAGT GGTTTTTAAA TTATCATTGC AAAATTTTCC AAATCCATGT 240
GGATTTTTTT TGTTGTTGTT TATGGAAGGG GAAAGAAATT GTGTGTGTGT GTGTGTGTGT 300
GTGTGTGTGT GTGTGTGTGT GTGTATGATT AATGAGTCTA AATCCAAATT TCTACTTTGT 360
GGAACGGGTA GAAACCAACC CCCTGTTCTT TCCCATTGTG CCAGAAATCC ATGTTCCTCC 420
GCTTCTTGGA CCTCGGCCAC CCAGGGCCAG GGCTTTCTGT GTCATCCTGA AGAATGCACA 480
GCTGCTCCCA AGGAGAGTCA AAGAGCAGAG AGGAGCCTTA GCAGCTATTT AGTTCAGCCC 540
TTTATTTTGC AATGAGGGAG ATGATCACTC CACCTTCTTA TAGAAAGAGA GCTTTAGGGA 600
GCCTCATTTC TTCTGGATTT TCTGACTCAT AGACTATATT AAAAATACCT CAGTACACTA 660
GAGAGGAACT CCAAATGGCA ATTGTCGAAG CACGCTTGCC CAGGGATCCT GCAGGCCCAA 720
CCACCTGTGT CGCCTGACAT GGCATTTTTC TGGTTTTCCA GTAGCTCCAA GACTGGGTTC 780
TTCCATGCAC CCCATCTGCT CTTGCCCCTC TGCCCAAGTC CAGCCTTCTC TCTCCTCCAA 840
AAGTCTCTTT CTCATTGCCT GTAGCTCTCA CCTCTCTGAT AACTGCCCCC AGATCTGGAA 900
GAGCAGAATC ACCAGGCCAG CAGGGACCAG CGACTGCCAG TTTACTCAAC TGGACGGGTG 960
GTTTCTATTC TTCATCTCAG CTGAATTTCT GGGTAGCATT TGATGACAGT TCATTTCAGC 1020
CTCTTTCCTG AAACTCCTTT TCTAGGCTTC CTTGACCTAG AAATCTGAGT 1070