EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS135-00361

Organism

Homo sapiens

Tissue/cell

MM1S

Coordinate

chr1:230258180-230260550

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TP63

MA0525.2

chr1:230258210-230258228

AGCATGTTGGGACAAGTG

6.6

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_25348	chr1:230252254-230266836	DND41
SE_31112	chr1:230256676-230263290	Fetal_Thymus
SE_34791	chr1:230259683-230263356	HeLa
SE_37247	chr1:230257275-230262876	HSMMtube
SE_39366	chr1:230257652-230260700	Jurkat
SE_40177	chr1:230259628-230264994	K562
SE_43672	chr1:230256113-230262219	MM1S
SE_45719	chr1:230259726-230262208	Osteoblasts
SE_49908	chr1:230257731-230263174	RPMI-8402
SE_50426	chr1:230255994-230259533	Sigmoid_Colon
SE_50426	chr1:230259740-230262130	Sigmoid_Colon
SE_58501	chr1:230239434-230311477	Ly1
SE_61418	chr1:230219055-230306985	Toledo
SE_66256	chr1:230257652-230260700	Jurkat

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I230121

chr1

230257728

230263347

Enhancer Sequence

CTCAGTGACC CCCTCATCTT TTCAAATCAT AGCATGTTGG GACAAGTGTT CCAGGGAAGG 60
CCTCTGTCAG TGTTTAGCTT ACATTTCTTG GGTGTATCTT TTTGACAAAA TTTTCCCCCC 120
AGGGATAAGG AAACCAGAAA ACCACAGTGG ATCAGCGTGC AGGAATGCAT AAGGGTGGCT 180
CTGTGTGTGT GTGTGTGTGC ATGTACATAC GTGTGTGTGT GTGTTCATCC GTGTGTGTGT 240
GTTTTCCTTC AGAGCATTTT AAAGGTCTCA GCTATTATTA ACATGAATTT ATTATCTATA 300
TTTAGGATAA GCCCACTAAG GATGATTTGG GATGAGCTGT GAATCTGTGG TGTATATATA 360
GATCTCTGCA CACGCGTATA GTGCATATTT ATGTCTGCAC GTACTCCTGG GCGTTGACAT 420
CTGCCTGTGG AATGCAGACA TCTCTGTGCA GGGTTGTGGC CTGTCGTCTC TTGATTGGCA 480
GTTGAAGTGT CCCGCATCCC CTTGTTATTA ATAACTTGCT TGGGGCTACA TTGAGTTGGG 540
GATGTGCAGT AGTGATTTAT CAAGACATTG TTATAAAGAC ACAAGGCTGG TTGTAATAGT 600
CTAATCAGAA CAAGTGTATT CAAAGTGGCG AGTTTCAAGC ATGCTGTTTA GGAGACTTCA 660
CACTTATTTT CAGCGTTCAG AACATTGTTG AACCTCTGCT TTTGGCATCG TGGTCACAGC 720
TAGTCTATGA GCCTTAGGAG AAATTATACT TGCCATTTGG TGCCCACTGT GAGTTTCTGA 780
CCAAGAACAA AATTTCCAAG CTTGATCACC TGCCTTATTC GTGACGCTTG GCTCCAAGTG 840
GTTGTTAGCT GTTTCCAAAA AACAAATGTG CTTTAGAGGA TGAACATTAT GCTGTTGTCT 900
CTGGGGGCCA ACCCGTTAGG GGAGTTCCAG AAATATTTTG AATGATGACA GCATCATGGG 960
AATACCAAGG GTCTCCCCAG GGGACTACTT TGAAGAGGGG CACATGCAGG TTGGTCATGT 1020
CTTTGTGTGA GTTCCAGGGT TCGAAAATAA CTGACGTATA CTGGTTGTGT ATGTCTGTGT 1080
GTGTGTTGCC CGCACAGCTA AGTTTAGACA CCGAGCTTTG GAGACCTCTG AGAGCCGACT 1140
CCACCTTTGA TTTTCAGTTG TCTTTCATTT TGTACCCATT TGGTATTGTC TTGCTTGAGC 1200
CTTTGTGGAA ATAGACCTTG ACTTCATTTC TTAAGTCTTT TTTACTTTCT ACGATTATGG 1260
AAAGGAAAAA TATATATTTT ATTTAGAAGG CAACAGGTGT ACTTATGTTC TTCTCCTATA 1320
TGATGGGTAG TGGAAATGTT TTAATTGCCT TCTTTTGTCT ACTTTAACCT CATGATCATT 1380
GCCTTTGTTT GCTAGTCTCT CAGCATGCGT GGTTTTGAAA ATGACCTGCA CACTTAGCAG 1440
ATGTGATACA GAAACCAAAC CCCCGAACCA CACTGTCAGG GGACTCTAAA AATGTGAAAA 1500
CACCTGGTTT TGGTTTCTTA GTCATTCTGT TTATTTGGTG AACTCTGTAG CTTCAAACGT 1560
ACAGCTTTGA CCACTTAATG AAAGCATGTG GATAGTGACG TGAGGATGAC CTGAAGATAT 1620
GACTCCCTGT CCTTTGGACT AAGTGGCCTT TAAACCAGTC ACGTGCCTGG CTCAACTTTA 1680
AAAAGAAGTA AAGACATTGT CATTAGATCT ATACAATGTC AAGAATATTA CCCGGCCTGG 1740
ATTTAGGTGG AAATGAATTA AGTGCAAGTA CTGATAGGTA CTTTCTGGGG GTTAATTTTA 1800
TTATTTTCTT CTCTTTAATT TTGATGTAGA CATGGAGACA GCAGAGGGAG AGACACCAAT 1860
TCTTAAGCAT GTTGTGTGCT GGTGTGTTGC AAAACATTGC TGCAAGAGCT GTCTATCACC 1920
CGCAAGAGCC CTTCTGACCT GATCTGTGGT CGTACTGGAC TTGTGGCAAG CTGGAATGTC 1980
CCCTTGTCAC CAGTGGCGTG TTAATGTTAC TAAAAAGCAA GGAAAATATA ATTGAGTTCT 2040
CCCTAAATCT ACCTGTGGCA TGAAAAAATC TCTCAGGTTG CATCATGTCC AGAAATAACT 2100
ATGGTGGGGC CTAATGGGAG TAATTCCCTG GCTCCAGGTA TTTGGAGGAG GCAGGCAGCA 2160
CTTCTCATTG GAGTGATTTG GAACCAAGGC AGTACATTTT CCTGCTGTTC CTGAACAATC 2220
TGAAGTTTTG CAGATCCTTG GAGAAATAAA AGCCACAGTC TTGGAACCTC CCACCTTCTT 2280
TTGGCCTGAG TCCTTCTCAT GAATTCAGCA ACCAAAATGG AGTCATGGGG ACGGGTGGGA 2340
CCTGCCGTGA TGGTCCCACC TGCATTACCC 2370