EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-03948

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:178995230-178996980

Target genes

Number: 4
Name	Ensembl ID

FAM20B	ENSG00000116199
TOR3A	ENSG00000186283
ABL2	ENSG00000143322
SOAT1	ENSG00000057252

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr1:178996658-178996673	TGGACTTTGGCCTCT	-	8.55
Hnf4a	MA0114.3	chr1:178996656-178996672	GTTGGACTTTGGCCTC	-	6.53
KLF16	MA0741.1	chr1:178995354-178995365	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:178995355-178995365	GGGGCGGGGC	-	6.02
TFAP2A	MA0003.3	chr1:178995557-178995568	CGCCTCAGGCT	+	6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_40379	chr1:178995105-178997008	K562
SE_60189	chr1:178994076-179005053	Ly4

Enhancer Sequence

CAGGTGAGTG GCGCGGGGGC GGGGGAGGGC GCGCGACCCC CGCCCCCGGC GCGGCGGGCG 60
GGAAAATGCG GACCGGCACG CGGGCGGGGC ACGGTACGTA GCGCGCGCCG GGCTGGGGCC 120
GCCTGGGGGC GGGGCGCCTC CCTGAGGGGC CGGGCACCGG GTGCCCTGAG CCGTCCCCGA 180
GTGGCTGCGG GCGGGTCCCG GGCGAGGGCC CGAGGCTTCC TGGGAGACCC GCTCGGGCCG 240
CGTGTCCCTG TGTGCGGTCG CGGCTGAAGG GACGCGGCCT CGGCCGCCAC GTCCCTGGCC 300
CACCTGAGGC GCGGGCCCAC CTGGGGCCGC CTCAGGCTGC CAGAGGTCCT TCTAGTGACC 360
GTCTCTCGTC CCCTTGCGCG GTCCCCAGAG GCGATTGGCC CCGGTGCCTC TCTTGTGTTC 420
CCCGGAGCGC CCGTTGAGGC AGCCCAGGGA GCGCGCCCTC GCGGGGTCTT TGCTGGGCCC 480
GCCTCGTGGC CGGGAAGCGC GAGTGACCTG CAGGCCGGAG GCGGAAGGCG GGGCAACCGT 540
GCCCGGGGCC CGCGGTCTCC TGGGGTCCTG CGCCGGGCGC TCGCAGAAGG GCACAACTTA 600
ACGAATGCTG TGTTAGCCCT CAGTGGGCTG CGCTTGAGAT TTCATTTCCG GGTGTGACGG 660
CCCCGCGATT AAGAGCGGAC CGATACGTTT CCCTTAATGA TGAATGTGAA TAGTTGTCGA 720
GCTGCGTCCT TGATTGTGGG TTCTGATAAG AGATTCATTC TAATCTGACT TCTGTTAACC 780
TGCCAGTCTC CGGATAAGAA GAGAAGGGGT AGAAGGATGG ATTGGAGGGA AAGTAGGGGT 840
AACAGGGCTT GGTTAGTCTT AATGGAATTA TTAGTCCTTT TAAAGACCAT ACCATCATTG 900
GGATGGATAA GGAGTTTCTA ATTTGGGAAA ATGAGAGTTG CTTGCTATTG CGACTTGGGT 960
CTAGTGCCAG ATATCAGCAT CTTCCCCACC CAGCCAGCTT CCCTCTGGAG GTTTGATTTC 1020
TCACTTGGAA GGGAAGTAGG AATGTGGGGT TTTTTTTAGC CTTTAGCCTT TAAACTGTAG 1080
GACTTTATAA ATCTATAATC TGGTACAAAT TACTATTGCC ATTTATTAGC CACGCCTATG 1140
TTTTTTGCGT TGTAAATTCT TGCAAAAATT TCACTGGCGT TGATTTCTAA AAATCTGGTT 1200
AGAGATCTCA GTGTTCTTAT GTATTACAAA CATTCCTTGA GTTTATGCAG GATCTTTGAG 1260
CTAAGCTTAG AGCACTTCCT CAAATATGAT TCGTTATCAC GACTGTCTGA GAAACTGAGG 1320
TACAAATGGT AAAGATGCTA AATTATTTGC CCAGACTCAT AGCCAATCTC AGGGAGATTT 1380
AAAATCAATG TATTCTATTA ATAACTTTTC TAAAGTTTGC AAAGATGTTG GACTTTGGCC 1440
TCTCGAACCG TACAATGGAA TCAGTCAGCA GGAGTCCCTT TCCCATTTGA AATTACTTAT 1500
CAAAGGAGAA TACAAAGGCA CACACAAGTA TAATTCAGAC TCTCAGCCTC ACTCATGATA 1560
AAGTGCAGTG ATAAATATGG ATACAGGTAA AAGATGATCA AGACATCTTG GAGTTCACAG 1620
CGTTTCTTTT CTGTGTGGTG AAAATGTGAC ATTGGTATGC TCTATTCGTT TCTCTAGAAC 1680
TGGTAGGACA GTAGCTATGT TTTGGTGAAT GAATGGAAAC TAGAAAACAC ATACACTGCT 1740
TTTCTTTTTG 1750