EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-01385

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:54447660-54448760

Target genes

Number: 14
Name	Ensembl ID

LRP8	ENSG00000157193
TMEM48	ENSG00000058804
YIPF1	ENSG00000058799
DIO1	ENSG00000211452
LRRC42	ENSG00000116212
HSPB11	ENSG00000081870
RP1	ENSG00000219102
AL353898.2	ENSG00000203276
TMEM59	ENSG00000116209
TCEANC2	ENSG00000116205
AL353898.3	ENSG00000237611
AL161915.1	ENSG00000212670
CYB5RL	ENSG00000215883
SSBP3	ENSG00000157216

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr1:54447861-54447882	TCTCCTCCTCCACCCACCTCC	-	6.03
ZNF263	MA0528.1	chr1:54447877-54447898	CCTCCTCCTCCTCCTTCCCCC	-	6.34
ZNF263	MA0528.1	chr1:54447864-54447885	CCTCCTCCACCCACCTCCTCC	-	6.62
ZNF263	MA0528.1	chr1:54447876-54447897	ACCTCCTCCTCCTCCTTCCCC	-	7.06
ZNF263	MA0528.1	chr1:54447867-54447888	CCTCCACCCACCTCCTCCTCC	-	7.67
ZNF263	MA0528.1	chr1:54447870-54447891	CCACCCACCTCCTCCTCCTCC	-	7.94
ZNF263	MA0528.1	chr1:54447873-54447894	CCCACCTCCTCCTCCTCCTTC	-	8.89

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I053981

chr1

54447474

54449090

Enhancer Sequence

ACAAAAATTA GCCAGGTGTG GCGGTGCATG CTTGTAATCC CAGCTACTCG GGAGGCTGAG 60
GCAGGAGAAT AGCTTGAACC CGAGAGGCGG AGGTTGCAGT GAACTGAGAT CGCACCACTG 120
CACTCCAGCC TGGGTGACGA GCGAGATTCC ATCTCTAAAA AACTAAATAA AAAGAGGAAG 180
AGACACAGTG CTCTCTTGCT GTCTCCTCCT CCACCCACCT CCTCCTCCTC CTTCCCCCCT 240
ACTTCTCTCC CTCCCTGAAT GCTTGCACCA AGGAAAGGCC ATCGGAGGCC ATAACCAGGA 300
AGAGAGCCCT CACGAAGAAC CTGACCATGT TGGCACCGAT CTCAGAATTC CGGCCTCCAG 360
AATTATGAGA AATAATTATT TGTTATTTAA GCCACCAAGT GTTTGGTATT CTGTTATGGC 420
AGCCCGAACT AAAACACATG ACTATTTGCT CAAAGGATTC AGAAAGCAGC CAAGAAGGAA 480
TAACGGGGGT CACATTCACC CTCCTGCCTG GAAAAAACTG GGCAGAATGT ATGAAGCAAT 540
AGTTTCAAAG TGCTAGACAG CAGGCAACAA AGGACAGTGA TCCCGGAGAA ACAGGAAGCA 600
AACGAGGTGA GCCCCGCGAT GGCTCCAGCT GCCTGCGGGG GAAGTTTCCA GGCTGCAGCA 660
CAGGGAAGGG GAGCAGAGGC GGAGCCCAAC AGAATTCCTG AATTGAAGCA GCAGGAGCTC 720
CCAGGACAGC ATACTGGAGA GGAGGAGCGG CACAGAGACA TCTCCGGAGA TAATGCGCAG 780
AGAGAGAACT TCAGCGGAGT GCTGCTCAGC ATGTGCGTGT GAGCAACCCA CTCCAGGCCA 840
GGGTAGGAAC CACCCAGAAG GATGAGAGGA ATCTAACTTT GATGGTCATA AAAAACAGAA 900
TAGCTTCTGT TCCCACCAGT CAGACAGGAA AGCCTCATTA TCCATGGGGT ATTGGATAGG 960
GCACTCGGGA GAGTCTTGCC TCAGTCATGG GGAATAATTA ATCCTAGGTA ATAATTAGCC 1020
TAGACAAAAC ATGGCTCTGC TCCCACCCAA TAAATCTTAA AAGCAAGAAT TTAAAGGATC 1080
AAACTGTTTC AAGTAACTTA 1100