EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-00738

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:29488140-29488830

Target genes

Number: 14
Name	Ensembl ID

RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
SNHG12	ENSG00000197989
YTHDF2	ENSG00000198492
RP1	ENSG00000226852
EPB41	ENSG00000159023
RP4	ENSG00000225616
TMEM200B	ENSG00000253304
SRSF4	ENSG00000116350
RP11	ENSG00000237934
MECR	ENSG00000116353
PTPRU	ENSG00000060656

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_00764	chr1:29487634-29489398	Adipose_Nuclei
SE_13923	chr1:29488439-29489491	CD34_Primary_RO01536
SE_28354	chr1:29488255-29489250	Fetal_Intestine
SE_29089	chr1:29488095-29494248	Fetal_Intestine_Large

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I029160

chr1

29486933

29489491

Enhancer Sequence

CTCGCTGTCG CCCAGGCTGG AGCGCAGTGG TGCGATCTCA GCTCACTGCA ACCTCCACCT 60
CCTGGGTTCA AGTGATTCTC CTGCCTCAGC CTCCCGAGTA GCTGGGATTA CAGGCGCACG 120
CCCCCATGCC TGGCTACTTT TTGTATTTTT AGTAGAGACA GGGTTTTGCC ATGTTGGCCA 180
AGCTGGTCTC AAAACCTCAG GTGATTCGCC CTCCTGGGCC TCCCAAAGCG CTAGGATTAT 240
AGGCGTGAGC CACTGCGCCC GGCCTCCAGT TTCTTTAGAA TGTGATGCTA TACTCAGTAA 300
CATGTTAAAT AAGTGAGAAC TCAGAATTGT GGAATTTTTC CTTTACTAAA GAGTTCCTTT 360
CATACAACAG TCTCTCAAGG TGACAATGTG CTAGGTTACA ATGTGTAGGT AACAACGTTG 420
GAGGGTTTTT TATGTTGAAA TGTCTGAGTG GCACTGAATG TCAACTCCAT TAAAAAAAAT 480
TAACACAGAC ACACCCGGTT ATTTAACAGG AAGTGCCTTG CAGTAACACA ATTCAGAAGC 540
CACCTGGCTC AATTTATGGG CTGTGAAGTC TTTAAAACAT AGTTTCACGC TTCCATAGGC 600
TAGAATTGCT GAGCAGCTTA ATAAGAAGGA TTTTGAACAT GCTGTTATCT TAGAAAAGGC 660
AAGTAAAGCC TCTCGAAATC CCTGACTTAC 690