EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-00124

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:8084400-8086210

Target genes

Number: 8
Name	Ensembl ID

VAMP3	ENSG00000049245
PER3	ENSG00000049246
RP3	ENSG00000236266
UTS2	ENSG00000049247
PARK7	ENSG00000116288
ERRFI1	ENSG00000116285
RP11	ENSG00000238290
CTA	ENSG00000232848

dbSUPER

Number of super-enhancer constituents: 21
ID	Coordinate	Tissue/cell

SE_01874	chr1:8085436-8088659	Aorta
SE_26425	chr1:8082149-8086213	Duodenum_Smooth_Muscle
SE_33765	chr1:8083536-8085985	HCC1954
SE_34231	chr1:8081590-8089572	HCT-116
SE_34846	chr1:8084635-8089008	HeLa
SE_36407	chr1:8076892-8087425	HMEC
SE_36931	chr1:8081701-8089203	HSMMtube
SE_43122	chr1:8085183-8088662	Lung
SE_45526	chr1:8085058-8086348	NHLF
SE_45858	chr1:8080914-8089736	Osteoblasts
SE_47106	chr1:8071905-8085963	Panc1
SE_47909	chr1:8085442-8088288	Pancreas
SE_51696	chr1:8084957-8086171	Skeletal_Muscle_Myoblast
SE_52775	chr1:8084969-8088733	Small_Intestine
SE_54897	chr1:8081271-8089554	Stomach_Smooth_Muscle
SE_55872	chr1:8083604-8089851	u87
SE_57459	chr1:8085410-8086385	VACO_503
SE_63484	chr1:8083481-8084585	HSMM
SE_63484	chr1:8084898-8088893	HSMM
SE_64486	chr1:8077922-8086202	NHEK
SE_67534	chr1:8083604-8089851	u87

Enhancer Sequence

ACCCGTCAAA AATATCAATA ATTCAGGCAT TTCATAACAG CCATAAAAAA ATTAAACAGA 60
TTTGCTTTCC AACCCTTATC AATGACTGCT CCAATCCTGC TGAGCCTTAA AAGGTAAAAC 120
ATGCTTTCAT GCAATTATTT ATCAACATCA ACTATGTGCA AGGCTGCATA AGATAGAAGC 180
TATACAAGGC AGAGTGCCTA CCCTTAAGGA GTTTACAATC TAATATATCT GTCAGGTTAT 240
AAATCGTTAG TCTAAGACCT CTATCACTTA TTATCGAGTG TCCCCTGGAA CACACAGGTG 300
AAAATAAACT TCTGCTTGAA GCAAAGGGAA TGACAAATAG TTTCTGAAGT CCATGCTAAA 360
TCCTTTGTTA TTTTTCTTCA AACTTGCTAA TATCTGGAAA AGAACTTGCT TGATAACATA 420
TTGGTAACCA ATTATAGCCA GCATGTTAGC AAGAAACCAG CTTCTTTTAT TTTGGTCTTT 480
GCAAAATTTG ATCATTTGCT GATACCTAGC CTGTCTTTGG TCTCTGTTCA AATAAAATTT 540
CACTTAAAAC TGTATATTGT AATTACAGAA ATATAAGAAA AGAAATGCAG TTAAAAAAAT 600
AGGTACGGTG AACTTGGGAT GTTCAGTCTC AACAAATGTG TGTACCCACT GCATTCTTAC 660
ACATTTATAA AAGGTTGAAC ATTTGTTCTG GAAGGGAAAA AAAGGGCATT TTAACCTCAC 720
CTTTCTTCAC CCCTGACAGT TGCCTAGAAA CCAGTCTTGC CCTACCTGTG TTGCAGGTGT 780
ACCTCAAGTC ACCGACACAT CTCTTTTAAA GCTACAGTCT CCATTCTGAC TTAAGTTTAT 840
GACTAACCAT CTATTCATAT TTTTATCAGG TAAGAGACTG GTTTCTTTCA AGCAATGATG 900
AAATCCTAAT AAAGACTTAG CAAGCACTAA TACAGCACCA TTCACGGTTA AAGAGTCATC 960
TAATTTGTAC AGGGCTATGA TATACATATA AATACACACA CAAAATTCCC AATAAGCATT 1020
CACGTCTTGA ACACATAATT TTGCAGTCCG ATTCCATTCA AAGCCGTACT TAAGACACTC 1080
AGAGCAAAGA ATCACGTTTC TAGGAGAGAA GGAAGAGTTC AGAACAGCTT AGACGAATTT 1140
TTAAATACTG ATTTCGGCAT TACCATCGTC GCTGTGAGAT TAGGCAGAGG GAGCGGGGCT 1200
GACCGCCAGA GAACCGGTAC CAACCACCGC AAGCAATCGC CGAGCCTCCC ACCCCAGCTT 1260
TCAAGACAGG ATTTACGGGT ACACGGTGTG AACAAGACAA CGCAACCCCC TTTTTACAAA 1320
TAAAAAAAAA ATCAAACAAG CCCCCAGGCC CGAAGACGCT CATCCCCGCC GGGCAACCCC 1380
GCGAGCGCAG GCTGCGGGAC GAGGACCTTC ATGCTCGCCG CTCCCGAACC CCCGTCCGCT 1440
CCTGCGGTCC CGGTGCTGCG GGGACGTATC CCGGGCGCTC GGGTGCATGG CCCCGGCCAG 1500
CCGAGGGGCC GCGCGACGAC CACAGCCGGC GTGGAGAAGG CGGCGGGCGC CGGCACTTCG 1560
CGGCGTCCCC AGGCCCGGGC TGCGCCGCCG GGGAGGGTCC CGCTCTCCAC ACCTCAATGG 1620
GGAGAAGCCC GCGAGCGACC GGCCGGCCTC TCCCTCCATC CCAGAGACTC CGCGTCGCGG 1680
CGACCCTCCC CGCGCCCTCC ACGCCCCCGC CCTCGCGTCG GGGAGCCGCC TGGATCCCGG 1740
CGCCCGGCGC GGGGCCCCCT GAGGGAACGG AGCGCTGCGT GGCCCTCCCC ACCCCCTCAG 1800
CGCGCCAGGC 1810