EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS134-00026

Organism

Homo sapiens

Tissue/cell

Mesendoderm

Coordinate

chr1:2121220-2122190

Target genes

Number: 9
Name	Ensembl ID

NADK	ENSG00000008130
PRKCZ	ENSG00000067606
RP11	ENSG00000182873
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
MORN1	ENSG00000116151
RER1	ENSG00000157916
PEX10	ENSG00000157911

dbSUPER

Number of super-enhancer constituents: 13
ID	Coordinate	Tissue/cell

SE_02984	chr1:2120458-2122921	Bladder
SE_24063	chr1:2120663-2122484	Colon_Crypt_2
SE_28207	chr1:2120473-2122885	Fetal_Intestine
SE_29530	chr1:2120461-2122870	Fetal_Intestine_Large
SE_40333	chr1:2120433-2122106	K562
SE_46689	chr1:2120655-2122919	Ovary
SE_47622	chr1:2120663-2122616	Pancreas
SE_54645	chr1:2120364-2127955	Stomach_Smooth_Muscle
SE_55632	chr1:2121100-2122046	Thymus
SE_62490	chr1:2120386-2191742	Tonsil
SE_68393	chr1:2120436-2162432	TC32
SE_68394	chr1:2120436-2162432	TC32
SE_69135	chr1:2120546-2121995	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I002188

chr1

2120278

2122904

Enhancer Sequence

CTGCAAGGGA GGGGCCACAC TCACTCGGCC ACCTCCGCGG CATGCTGGCC GCAGAGAGCA 60
CCGTCTGGAC CTCCGGGCCC TCTCTGCTCC TGCCGCTGGA GAGGATCCGG CTGGTCAGAA 120
ACAAGGGACG GGGCCACCCC AGGGGCTCAT GCACCCGGCA GACCACGGTA ACCGCCAGTG 180
GTGTTTCCAC ACCGTGCCCG TGAGGAGGCC ACGCCAGGCC CCTGCGTCCG AGCTGGGGGT 240
GGGGAAGCTG TGTCTCAACA AGCCTCTCTA TGGGATTCTG GCGCCTGCTC AGCTTGAGAA 300
CGCGCTCATC GTGGAGCCCG GCAGACAGGC GGCCTGACCC GGAGAAAAGG CAGGACGGCG 360
GGTGGCCTGC CAGGGAGAGC CGCCGCGGCT GCGTCTACAG GAGGCAGAAG AGTAAACATG 420
GCTGGGCAGT GGATGTGCAG CTCACGTCAG AGAATTGGTG TTTCTGGCGA GGAGGGACCA 480
AGCCTCACCA CGGAGAAGGA CGCCGTCACC GGCGTGCAGG CTGCCAACCT GCCACTCTGG 540
GAGGCCCCAC GCGGCCCCTG CACCTCTCAG GAGGGCGCTG GCGCTGGGAT GGTGGCCGGC 600
CAGGCAGGGG TGGCAGGAGA AAACCCATCC GAGTCCTGCA GGTCAGCGCC CTGGGCATCC 660
AGTGGGGCCG GGAGGGGTGT CTGAGCGCAG CCACCTTCTA TCCCCGGCCT CATGTGGCCC 720
CATCAGCCCA ACTGGAGCGG CTGGAAATGA CCATCACCAG GCCTGGCCAA GGTGTGGCCC 780
TGGAAGCCAG GACAGTTGAC TTCCGGCCAT GACTCCCGGA GAGTGCCGGA GCTGGCGTGC 840
TCAGCAGAGC TGCCGGGGAC GATGTCCCGG GGCTGAGTGG GCGGCTTCAG CCTAGACTTG 900
GGCCTAGATC TTGCTGGAGG CCAAGTGGTC AGTGTCCCAT CAGAGTGACC ATCCCTCACA 960
CGCCACTGCT 970