EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-03909

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:236142410-236143120

Target genes

Number: 14
Name	Ensembl ID

TOMM20	ENSG00000173726
GGPS1	ENSG00000152904
ARID4B	ENSG00000054267
TBCE	ENSG00000116957
B3GALNT2	ENSG00000162885
GNG4	ENSG00000168243
LDHAP2	ENSG00000235674
LYST	ENSG00000143669
NID1	ENSG00000116962
RP4	ENSG00000235371
GPR137B	ENSG00000077585
ERO1LB	ENSG00000086619
EDARADD	ENSG00000186197
LGALS8	ENSG00000116977

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

USF1	MA0093.2	chr1:236142797-236142808	GCCACGTGACC	+	6.62
USF2	MA0526.2	chr1:236142795-236142811	CGGCCACGTGACCCTG	-	7.33
ZNF263	MA0528.1	chr1:236142932-236142953	CCTCCTTCTTCATGCTCCTCT	-	6.05
ZNF263	MA0528.1	chr1:236142929-236142950	CTCCCTCCTTCTTCATGCTCC	-	6.07

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_09146

chr1:236142626-236145242

CD14

Enhancer Sequence

CAAAGCACCA AAGGGCAGAA GGTGAAAACA CATCTGATGG CTTGAACTTG TATCTAAACA 60
AGGCAGCCTC TTTGTCATTT TGAGGATAAA CTGGAGGCCA TAAACAGACA TGATGGCCTT 120
CTTCCTAGAC ATCCCTTCCT TCCCCTGGGG TGGGTCAAGC CTGCATTTCT CTGGCTTTTT 180
ACAAAAGGGT AAAGACCAGT TAGCTCTCCC CTCCCACTCT AGATCCCAGG CAGGAAATGA 240
GCTTTCTAGA CAGATGCCCC TGGCCAGTTG TCTTCTCAGT TTAATCCCTC CTTTTGCAGG 300
AAGGGGTAGT CAGGAAGAGG CCGTGGGAAT ATTGCAGTTT AACAACTATA ATGAAGCAGG 360
GACATGAAGT GGACATGGAG CCCACCGGCC ACGTGACCCT GGGCCAACTC CTGGGGAAAG 420
AACAGACGTG CTGAGGAAGT CCAGGTTTAA AGACTTGAAA CCACACAGTC AGGAGCATCT 480
GGATGATAAA TGGCACCTCC TGTCCCCTAG GGCCTTGTCC TCCCTCCTTC TTCATGCTCC 540
TCTCTTGGCT CCTGACAACC AGAAGGATAA GGGAGAGGGG ACATCTCTAG AGGGGGCATT 600
TCTGGAGGCT CAAAAGTCAA GCCAAGAGGC CAGATGGGAA GGGCCTGGCC TCCCAGAGAC 660
AGTGGGTGGA GGGGCAGGCC CACGCAGCCC CCATGGCTAC AGCTGACGTA 710