| Tag | Content |
|---|
EnhancerAtlas ID | HS133-03870 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:234890490-234891720 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ETV6 | MA0645.1 | chr1:234891207-234891217 | AGCGGAAGTG | + | 6.02 | | Tcf12 | MA0521.1 | chr1:234891487-234891498 | AACAGCTGCTG | + | 6.32 | | USF1 | MA0093.2 | chr1:234891362-234891373 | GGTCACGTGGC | - | 6.62 | | USF2 | MA0526.2 | chr1:234891359-234891375 | GCCGGTCACGTGGCAC | + | 6.36 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_04206 | chr1:234890724-234892017 | Brain_Anterior_Caudate | | SE_05210 | chr1:234890622-234892170 | Brain_Cingulate_Gyrus | | SE_07154 | chr1:234890758-234892047 | Brain_Hippocampus_Middle_150 | | SE_45839 | chr1:234890547-234892193 | Osteoblasts |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I234754 | chr1 | 234890733 | 234892281 |
|
Enhancer Sequence | AGCAACAGAA AATATGCTCC CAAGTTCAAT AAGCAAAAGC AATAGATCTA AATGACAAGC 60
AACATGTATC AAAAGAGGCC ACACATTCAT CTTTCTGTGT GATCAATTTT GGGCAGATGT 120
GATACTACTT TTCTTGTAAA ACAAGCAGTG ATTTTTATGT TCTGCATAAG GGTTGTATTC 180
TATTTCTACA TTTTGAATGA AGGTAGGTTT TACCCAAGTT TAGTAATGAT AGCTACGTTT 240
ATTGAGTGTC TACTGTGCAG TGGTATACTG ATAAGTAAGT TCTTGGGAAG ACAATATCCC 300
CGCTTTGTGG CACTGGCTGA TTTCCATGGT GAAAATACTC TTGCCACGGC CAGTTTCAAG 360
CTACCAGTGT AATGCCACCA AACACAATCT CACCTCACCC ACCAGTGGGA GCTGCTCCTG 420
CCACCTCCCA AACTGTGTCA GAGCTACACA ACTATTCACA AGAATTTTCA CAACAACCCT 480
ACAAGGAAGA TATTATTGAT ATTGTTGGCT CCCATCCTAC CAATGAGAAA ACAGGCTGGG 540
AAATTATTTG CCCAAAGTCG CATAGCTAAT AAGAGGTGAG TTTGGGATTT AAACAGAGGT 600
CTGCATGACT CCCGAGCCCA CTGCCTTTCC AGTGCACCCC ACTTCCTCAC CACACAGCTG 660
TGCGTGAATG GAAGAATGTG GTGACCCACT ACTCACAAAC TCTGGCAACA CTGGGTGAGC 720
GGAAGTGTCT CCAGACAAAG ACCCATGACT GCCCCCAAAA TGCAAACCCA GCCTTGGAAG 780
ACATGAACTT TCTCACAAGC TATGAGGTGG CTTCGCTGGG CAGCTGTTAT CTTGCTCAGT 840
TTTGGCACAT TACCATGTGA TGCAATCAAG CCGGTCACGT GGCACCCACT CAGAGCATCC 900
AGCGGCACCA CAAGTAGTCA GAGTGTCTGG AGGAGGGCAT GGGAAGAGCC CTCCTCACAG 960
AAAGGCTCAG AAGGGACACA AACGCCCCTG CCCTTCCAAC AGCTGCTGGC CAGCAAAGTA 1020
CATCGGCTTT CAGTGATCCT GCATGTGAGT AGAAAGGGTG TTTCCAGCAC ATCCCAAAAA 1080
GGGTTTCAGA TAAGTCCTGC AGCTTCGGGC TCTTTCTTCC ACAACTTCTC CCTGTTTTTT 1140
AAATGGGGGA CAAGAGTGCT TGTCTCTCTA TAACCCCAGG AGATTCATGA ATAATGTCCC 1200
CGAAGGCTGT AAAATGACAA GATGGCAAGA 1230
|
