Tag | Content |
---|
EnhancerAtlas ID | HS133-03785 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:230239430-230242210 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
PLAG1 | MA0163.1 | chr1:230241093-230241107 | GGGGCCCACTGGGG | + | 6.86 | RREB1 | MA0073.1 | chr1:230239920-230239940 | GGTTCTGGGGTGGTGGGGGG | - | 6.25 |
|
| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_01245 | chr1:230239641-230243336 | Adrenal_Gland | SE_01785 | chr1:230239049-230240587 | Aorta | SE_01785 | chr1:230240637-230243187 | Aorta | SE_02496 | chr1:230239508-230241945 | Astrocytes | SE_25348 | chr1:230236453-230250730 | DND41 | SE_31112 | chr1:230238334-230250198 | Fetal_Thymus | SE_34791 | chr1:230238329-230243364 | HeLa | SE_36634 | chr1:230239950-230242005 | HMEC | SE_37247 | chr1:230239177-230242475 | HSMMtube | SE_39241 | chr1:230238979-230242188 | IMR90 | SE_39366 | chr1:230239361-230243263 | Jurkat | SE_43672 | chr1:230238380-230242897 | MM1S | SE_45047 | chr1:230239152-230242696 | NHLF | SE_45719 | chr1:230236856-230242994 | Osteoblasts | SE_49908 | chr1:230237167-230243238 | RPMI-8402 | SE_50426 | chr1:230239072-230243127 | Sigmoid_Colon | SE_51846 | chr1:230239549-230242044 | Skeletal_Muscle_Myoblast | SE_58501 | chr1:230239434-230311477 | Ly1 | SE_61418 | chr1:230219055-230306985 | Toledo | SE_63637 | chr1:230239456-230242241 | HSMM | SE_65792 | chr1:230239400-230241648 | Pancreatic_islets | SE_66256 | chr1:230239361-230243263 | Jurkat |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I230101 | chr1 | 230237569 | 230243904 |
|
Enhancer Sequence | ATGAAAGAAC CCATCCCTCC AAAACCACAC ACACAAAGCC AAAAGGAAAA AAAAAAAGCA 60 CATAATTATC ATGTAGGCAC TGTTGCAGCT AACCCTGATT TTGGCCTCAA TTCTGAAACA 120 AGTTAGCTGG TTTAGACAAA CCCCTTATTA GGTAATGGAT TGTTATTCAT TCCTCCCCTT 180 CTCCTAGTCA TTTACTCCGT GAGAGCTGCT CCTACCTGAC CTTCCACTGA TTTTGGTAGC 240 AGCATCTCCC AGAGCGACTG TTTCCTTCTT CAGCAGTGTT CCTTACTCAG GGTGTAAGAT 300 CTTAACCCCA CAGAGCCCCG TATCAGGTTT AATTAACTAA TTGATTCAGC TTGTGCTTAC 360 TGAGTGCGAG GCAGTCATGT GCTTCTGTTT GGTAAATGGC TTCATTTTCC CTCTAACTCC 420 TGAGCGTCCT GAAGCTTCTC TTATGGTTCT CTCCAAAGGA GTCAGCAGGC TGGCTCTGCA 480 AGGGTCAGTA GGTTCTGGGG TGGTGGGGGG CCGAGGGAGG CAGGGAGGTT GGCTCTGTCT 540 TTATTTGGCA TAGAGCTCCC CGAACAGGGT CTCTCCTCCT TTCTCCAAAG GTTAATGGAA 600 CCACTATCTT AAAAAGCTGA AATCTTATCT TCTGGGGTAT TTGGGTAGAG AAGGCTAGGG 660 AATCCCTTTT CCATGGTGGT GCAGTAGGTT CTCAGAACCA GCTGGTGGGC CTCAAAGAGA 720 GGCGGCTGTA TTTTAGCCTG ATAATCTTGA TTCCTGGTTT CCTGGCTCTG TAGCATCAGA 780 AATGGGAAGC TTTAAAAGCC GTGCCTTGTT GGATGCACCG AGTCATAAAA TAAATGTGAT 840 GTGCTGGGTG GGGGAAATGC GGGAGGAGGG AAACAGGTGG TTGGAGCTGC TTCGTGATGG 900 CCGCCCACCC TGGCTCTCCT TTCTTAATAG GCTTCAGAAA TCCTGGAATG CGTAATTCAC 960 CAGCTCACAG AGTTCCACCC ATGTCCCCAG TGGCTTCAAA ATGTAAATGA CATTTGCAGT 1020 GCTGGGAGGT AGGAGGGCGA TCCCGTTCCT TCCCTGGATC TCAGTCGCAG AGGTGCTGGC 1080 TCATGTGCCT GAGTGCAGCG GCTGGCCCGT CATTACTGGT CTTTGCAGGA AGCCACTCTG 1140 AAGGCACCTG GGCCCTTGCC AGGCTGAGTC ACAGCTGACT TAGGGAAATG CCACACAGGA 1200 CGCTTGCAGT CCCCCCGTTC TAAGCGTAGG TTTTGCAACT GCATACTCGG AAAATGAATC 1260 AGAGTGGGGG AAAGTGTCAG AGAAACAGCA GAAATGGAAT GTAGGCAGGA GGGCCACAGT 1320 GGCGCTGTGG ATTCAGACCA CACCTTCGGC TCTGTTTGGG GCCCTTCCTG TAAGGAGCGT 1380 ACTGATGCCA GAGGCTGGGG GTGTGGAAGG GAAGCTGCTG TGCTGTTAGA TCCATTCTGC 1440 TATTTAGCCA GCCTTCCTTT TCCCAGCTGG CACAGACAGG ATGTGTTAGA GAGGTGCTCA 1500 GACCTCCTTT CAGAGCAACT GAATCATTCT CCAGGAGGGA CAGGGAGTCT GAAATGCAAA 1560 CAGGTTCCCA GGGTTATTGA AGAGCAGCCA AACTGAACAC CCACTGCTCT GTGGACTCAA 1620 GCTGGTTTTA GACATTGTTT GGTCAGGACC AGAGCCGAGC TCTGGGGCCC ACTGGGGGCT 1680 CTTGTCGCAC CATATCATTG ATTCTACAAT GCACATTTCC CCCGCCTCTC ATGTTTTAAC 1740 ATGTCTGAAA TCAGGATGCA TCTTCCATGG ATGGTGTTTC AGGGTTTCAT TGATCGTGTT 1800 TTTCTTCCTG AGTGGCACAC AAAATTAATG GTGCTCCCTA GAGTTGATGG TCCCTGCGGT 1860 TCAGTGAACC GTGTTGCTCT TGTGTAAGCT CCTGTGGGAA CATAGAGTCT CTGTGTCCCA 1920 CCTTCTTCCT CGCAGTGGTC AGCACGGATG AGGTGGGAGT TGCATAAATG TCAGCATTCG 1980 AAAGTGAGGG CGTCTGTCGG TGCTGTCTCA CTGTGGGGCT TCAGAGAACG TGAGCACCTG 2040 TGTTTGCATT CTCCATCAAG GTTCATGTCC TGTTGGCTCA TAAGCATGAT TATATCCATT 2100 ATACAAACTG GGGCACAGGC ACCCAGAGAG AAGTCAAAAG ACTTGTTCAA GATGGACAAC 2160 TAGGAAGTGG TGGGGACAGA CCAGTCCTGT CTGATGCCAG ATCCAGCGCT GTATCTGCCA 2220 GTCAGCATGC ACACTTTCAT CTCTCCAGCC TCTTCCCACT CACCTTTACT CAACATTTCT 2280 GGGCCTCCAT AGTGATTGTA GTAATTCGGT AAAGATGATT CATTTCTTTA GTCCGGTCTT 2340 CGGACTTGAC TTCTTAGAAG CAGGTCTTGT GCAATAGTTG CATATTAACC ACTTGGTGAC 2400 ACAGTGCATG AGGGTATGCC AACTCTTTTT GCTCATGGCC GTGCAGTGCA GAATTTCCAG 2460 GCATTGTCCG CTCTGTTTCC TGGACTTCGG AGTGATAGCA AAGTTTTGTA TTCCCTGATC 2520 AGCTGTGTAT CTCTGAGCAG CAAGTTGATC TCTCTGTATA AGGGTGACTG TGCCCATGGA 2580 GGATGGCATG CAATTGCCTA AAGATTTCAG TCTGAGAATC TGAGAAACGA TACTGAATGG 2640 AGATGACAGG CTTAGTGCCT GCTTCCAGGA GCCATGCCTC CTCCTGGCCT GGAATGAATA 2700 CCTAAACACC TGAGGCTCTG AGTTCCGGCA GTGTGCTGAA ACTGCTGTTG GTCTGGCCCA 2760 CTGACCCGGA AACCCAGCCA 2780
|