Tag | Content |
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EnhancerAtlas ID | HS133-03187 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:201986800-201988490 |
Target genes | Number: 13 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Klf1 | MA0493.1 | chr1:201988332-201988343 | AGCCACACCCA | + | 6.14 | NR2C2 | MA0504.1 | chr1:201987451-201987466 | TGCCCTCTCACCCCT | - | 6.45 | NR2C2 | MA0504.1 | chr1:201987162-201987177 | TGACCTTTGCCCTGC | - | 6.4 | Nr2f6 | MA0677.1 | chr1:201987162-201987176 | TGACCTTTGCCCTG | - | 6.45 | RARA(var.2) | MA0730.1 | chr1:201987749-201987766 | AGGTCAGAGGGAGGTCA | + | 6.41 | REST | MA0138.2 | chr1:201988024-201988045 | CTCAGCACCTTGCACAGCGCC | + | 7.87 | Rxra | MA0512.2 | chr1:201987162-201987176 | TGACCTTTGCCCTG | - | 6.09 |
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| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_23058 | chr1:201986872-201988608 | Colon_Crypt_1 | SE_23723 | chr1:201986912-201988613 | Colon_Crypt_2 | SE_24689 | chr1:201986888-201988638 | Colon_Crypt_3 | SE_25977 | chr1:201976074-201988947 | Duodenum_Smooth_Muscle | SE_26730 | chr1:201985712-201988797 | Esophagus | SE_27624 | chr1:201975812-201989193 | Fetal_Intestine | SE_28545 | chr1:201974530-201989440 | Fetal_Intestine_Large | SE_31432 | chr1:201983938-201989177 | Gastric | SE_33417 | chr1:201986876-201989229 | H2171 | SE_33792 | chr1:201978127-201990221 | HCC1954 | SE_34304 | chr1:201974676-201989923 | HCT-116 | SE_34741 | chr1:201985668-201989981 | HeLa | SE_41626 | chr1:201986861-201988608 | LNCaP | SE_43434 | chr1:201986862-201988630 | MCF-7 | SE_47796 | chr1:201986886-201988593 | Pancreas | SE_50066 | chr1:201978058-201988672 | Sigmoid_Colon | SE_52354 | chr1:201976011-201988714 | Small_Intestine | SE_56834 | chr1:201986879-201988600 | VACO_400 | SE_57376 | chr1:201986910-201988595 | VACO_503 | SE_57945 | chr1:201986912-201988581 | VACO_9m | SE_65333 | chr1:201986253-201989108 | Pancreatic_islets | SE_67013 | chr1:201986876-201989229 | H2171 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | GGGCATGCTG GCACGCGCCT GTAGTCCGAG CTACTCAGGA GGCTGAGGCA GGAGAATCAC 60 TTGAACCCAG GAGGCGGAGG TTGCAGTGAG CTAAGATCAT GCCACTGCAC TCCAGCCTGG 120 TGACACAGGG AGACTCTGTC TCAAAAAAAA GAAGAGAGGT GACCCAGTGT GGCCTGAAGT 180 CACCTAGCCA AGAAGTGGGG GAGGGGCCTC TAGAGCCCGG GACATGCTTG TTCAGCCTCC 240 CTTGACTCCC AGCCTCTTCA GCTTCTAAAG GAGATCCTAG CAGGGAGGAG GGCTGGGAAT 300 ATGGCGCTCA GCCCCTTCAC CCTCTTCTGG AGGGCTGGGG GCAGGTGCTG CCCGCTGCGT 360 GCTGACCTTT GCCCTGCCAT TTGCAGTTTA TGAGGCGCTT TCCTCATCCC ATTATCTCAT 420 TTGATCCGCC CCACAGCTCG CTGAGGAGAC CAGGTGTCCC CATTTTACTG ACAAGGCTAG 480 TGGTGGGCTG AAGTCACTGA CTGGGTGAGA GCGGGGCCAG CTCACAGCAT GCCTGCCTCC 540 ACGCTGCAGC TCAGTGAGAC CACCTGGGCA GGTGGCCTCT GCAGGGCAGC GCCTGGGACA 600 GCCTGGAAGA CGGCAGCTCT GGGAGGGACG CCTTTCTCCC CAACAGTTCT CTGCCCTCTC 660 ACCCCTCAGG ATGCTGCAGA GTCCTGGCAC GGGCCCCTGG GCTGGCCTCC GTGCTGCCCT 720 CTCTGTCGGG CACCAGTCAC CCTTACCCCG ACTCTCACCA GCCCAGGGGC CTCCTAGCAG 780 GAGACGGCCC GGTCTCTCGC CCACCAGAGT CTGCATCCCC TCAGGTGTGT CCTGGGCTGG 840 GGAGTGGGGG TGGGGAGGAA GCCACAGGGC CGGGCTGTTT ATATCCCGCC CTGCCGGAGC 900 TGCTGGTCAC CTCTTATCTG CTTCTGTGGG ATTGGGTGTG TCGCTGAGCA GGTCAGAGGG 960 AGGTCACCCC TCCCGTCGTG TTTGGGTGTG CCTGAGGAGG GGCTGGGGTT GGCCCCCTGG 1020 GACAGTTCCT GGCTTATCCC ACAGCCCCAC CTGTCCCACC AATTCTGGGG AAGTCTGGCT 1080 TCTCCTGGGG GAAGTGGGTG AAGGGGTTGC ATTTCTGAGG AGTCTGGTTT CAATCTGCTC 1140 TCTCTCTCTG CTGTTGTCTG TTTACACATC TCTCTCTCTC GCCGGGCTGT GAGCACCTCT 1200 GGGCAAGTGC TGGGGCTTAC TCACCTCAGC ACCTTGCACA GCGCCTGGCA CAGAGGAGGT 1260 GCTCGATAAA TATTTGCTAA ATGGCCCCGT GACTCTCCCT GCCCTGGCCA CTACCTCCCC 1320 CACACACCAC ACACATTCAT ACACACTCAT GGGAACCAAA GTCACACACA CTCACACTCA 1380 CAAAGATAAA TATTCACAAG CCCTCACTCA CATGCCCCTG CACGCACTGC AGACGCTGCC 1440 TGCTCTCACA CACTCGCATG GACCGTATTC ACAACCTCAC ACACTTGCAC ACACCAGCGC 1500 ACGCAACACA CTCCCACCTC ACAGTCTCAC ATAGCCACAC CCAGGCCTGC CTGCACGACT 1560 CACCTCCTCC CTCGGGGTCC TTCTATGAAG CATTTCCTGA CCTCCTCTTT GGCCCTTTTC 1620 CCCCACCAGA TGGGTTCAGC CCTTGCCTCC AGTCAGGACA GGCCTGGTAA TTTGCAGAGC 1680 CCAGTGCAAA 1690
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