EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-02596

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:156785630-156785790

Target genes

Number: 30
Name	Ensembl ID

GON4L	ENSG00000116580
RIT1	ENSG00000143622
KIAA0907	ENSG00000132680
LAMTOR2	ENSG00000116586
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
SEMA4A	ENSG00000196189
SLC25A44	ENSG00000160785
RP11	ENSG00000260238
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
CCT3	ENSG00000163468
MEF2D	ENSG00000116604
IQGAP3	ENSG00000183856
APOA1BP	ENSG00000163382
GPATCH4	ENSG00000160818
BCAN	ENSG00000132692
NES	ENSG00000132688
CRABP2	ENSG00000143320
RRNAD1	ENSG00000143303
ISG20L2	ENSG00000143319
MRPL24	ENSG00000143314
PRCC	ENSG00000143294
HDGF	ENSG00000143321
SH2D2A	ENSG00000027869
ARHGEF11	ENSG00000132694
KRT8P45	ENSG00000224520
ETV3L	ENSG00000253831
ETV3	ENSG00000117036

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_12043	chr1:156782651-156788210	CD3
SE_16745	chr1:156782615-156787967	CD4_Naive_Primary_8pool
SE_17109	chr1:156782713-156787538	CD4p_CD225int_CD127p_Tmem
SE_17969	chr1:156780522-156788565	CD4p_CD25-_CD45ROp_Memory
SE_18856	chr1:156780579-156788503	CD4p_CD25-_Il17-_PMAstim_Th
SE_19275	chr1:156780575-156788181	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20224	chr1:156782353-156788476	CD56
SE_22459	chr1:156781271-156788487	CD8_primiary

Enhancer Sequence

GTACTCCTCA TTTTCGTTCT CTCTCTCTGT GCCCCAGCCC GTTGGCAGAC CCGGATCATT 60
CCTGCCTTCT CTTGGAGTGG CCTTTGTCCA TCTGCAAGTC CTTCCCCATG GGAGGGTGGG 120
AGAGATGAGG GAGCTGCACC ACGCTGCCGC CCCAGGTTTC 160