EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-02437

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:154387090-154387770

Target genes

Number: 21
Name	Ensembl ID

RPS27	ENSG00000177954
TPM3	ENSG00000143549
UBAP2L	ENSG00000143569
C1orf43	ENSG00000143612
HAX1	ENSG00000143575
ATP8B2	ENSG00000143515
RP11	ENSG00000226855
IL6R	ENSG00000160712
SHE	ENSG00000169291
TDRD10	ENSG00000163239
UBE2Q1	ENSG00000229780
CHRNB2	ENSG00000160716
ADAR	ENSG00000160710
PMVK	ENSG00000163344
PBXIP1	ENSG00000163346
PYGO2	ENSG00000163348
SHC1	ENSG00000160691
CKS1B	ENSG00000173207
FLAD1	ENSG00000160688
ZBTB7B	ENSG00000160685
ADAM15	ENSG00000143537

dbSUPER

Number of super-enhancer constituents: 24
ID	Coordinate	Tissue/cell

SE_01040	chr1:154386764-154387805	Adrenal_Gland
SE_09189	chr1:154384822-154388512	CD14
SE_14719	chr1:154386944-154388206	CD4_Memory_Primary_7pool
SE_16173	chr1:154386888-154387815	CD4_Naive_Primary_7pool
SE_17632	chr1:154385721-154388198	CD4p_CD25-_CD45RAp_Naive
SE_18405	chr1:154386689-154388336	CD4p_CD25-_Il17-_PMAstim_Th
SE_19165	chr1:154385652-154387288	CD4p_CD25-_Il17p_PMAstim_Th17
SE_19165	chr1:154387314-154388077	CD4p_CD25-_Il17p_PMAstim_Th17
SE_24531	chr1:154387407-154387707	Colon_Crypt_2
SE_26877	chr1:154386735-154387795	Esophagus
SE_32086	chr1:154386760-154387854	Gastric
SE_41139	chr1:154386714-154388031	Left_Ventricle
SE_41647	chr1:154386711-154387737	LNCaP
SE_42431	chr1:154386705-154387852	Lung
SE_43544	chr1:154384840-154394484	MM1S
SE_47983	chr1:154387407-154387685	Pancreas
SE_48261	chr1:154386263-154388037	Psoas_Muscle
SE_48934	chr1:154386552-154387770	Right_Atrium
SE_51380	chr1:154386807-154388090	Skeletal_Muscle
SE_54618	chr1:154386068-154388174	Stomach_Smooth_Muscle
SE_59139	chr1:154375857-154394038	Ly3
SE_62668	chr1:154357227-154415486	Tonsil
SE_65390	chr1:154386786-154388177	Pancreatic_islets
SE_67236	chr1:154384840-154394484	MM1S

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I154412

chr1

154384823

154388512

Enhancer Sequence

GATAGTGTCA AGCAGGATGT CGATGAAGAC GGTGTAGCTC TTGGCGAGGA TGTTACCCTT 60
GGCCAGGAAC ACTTTGTTGT AGCTGCCCTC CATTAGGTAT TGCTCCAGGG ACACAGGGTT 120
TTTGGTGTAG ACATTGGTCT GGATGTCCTT GGCAGGCAGC CACTCCAGCT CCATGTGGAA 180
CTCAGCCACC CGCTTCTGGG ACAGCAGGAA GAGGAGATTG AGGCCCAAGA GCTGGTGCAT 240
GTAGGCTGAC TGGGGAAGCT GTTCCTTGTA ATCAAAGTAG CAGCATTTGA GCTGGGTCAT 300
GTGGCGCTGG AAGGAGGGGA TGTCCTCGCA TAGGATGCTC CACTGGCCCC GATCTTCAGT 360
ATGTCACGGG CCAGAATGAG CTGCTGTTTG GTCAGCTTGG TCCCTGTGGT TGGCAAGAAG 420
TTGAGCTCCA GAAGAACTAG CTTGAGGCAG CCCAGCTCTT CCCTGCACTT GCTAAGATTG 480
GGGCTTTTAC GGTTCCACTC GCCCTTGAGT TGCTTGTACT TGCCGTCCTC AGCCTGCAGG 540
ACAGGGCCCT AGGTCGCCAG GGGCCCGGAG CTCAAGGCGC CGGCTGCACT GTTCACCTCC 600
ACCCCCATTC CAATATTTTA AAAGATTCTC CTTTTCTGGT ATTGTTAAAA GTTTTAAAAG 660
TTTAAATATT TGATCCATTT 680