Tag | Content |
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EnhancerAtlas ID | HS133-01493 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:43397330-43398920 |
Target genes | Number: 13 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MYB | MA0100.3 | chr1:43398565-43398575 | GACAGTTGGT | - | 6.02 | RREB1 | MA0073.1 | chr1:43398223-43398243 | ACCCAACCCATCCCAACACC | + | 6.09 | SREBF1 | MA0595.1 | chr1:43398835-43398845 | ATCACCCCAC | + | 6.02 |
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| Number of super-enhancer constituents: 41 | ID | Coordinate | Tissue/cell |
SE_01795 | chr1:43397398-43398157 | Aorta | SE_05390 | chr1:43397289-43399585 | Brain_Cingulate_Gyrus | SE_06192 | chr1:43395065-43405505 | Brain_Hippocampus_Middle | SE_07319 | chr1:43396705-43398566 | Brain_Hippocampus_Middle_150 | SE_08269 | chr1:43397488-43399602 | Brain_Inferior_Temporal_Lobe | SE_10377 | chr1:43396392-43405534 | CD19_Primary | SE_11009 | chr1:43387831-43425728 | CD20 | SE_12470 | chr1:43397348-43399808 | CD3 | SE_13825 | chr1:43396778-43399313 | CD34_Primary_RO01536 | SE_14471 | chr1:43395753-43414527 | CD4_Memory_Primary_7pool | SE_19657 | chr1:43396427-43405202 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20345 | chr1:43395492-43405550 | CD56 | SE_20799 | chr1:43396312-43405729 | CD8_Memory_7pool | SE_22754 | chr1:43395674-43405513 | CD8_primiary | SE_23189 | chr1:43397346-43399720 | Colon_Crypt_1 | SE_23904 | chr1:43397399-43399265 | Colon_Crypt_2 | SE_25177 | chr1:43396926-43398787 | Colon_Crypt_3 | SE_26580 | chr1:43395721-43413249 | Esophagus | SE_29267 | chr1:43397108-43398616 | Fetal_Intestine_Large | SE_31882 | chr1:43396701-43399114 | Gastric | SE_33837 | chr1:43396695-43400408 | HCC1954 | SE_34353 | chr1:43395339-43412997 | HCT-116 | SE_36013 | chr1:43398145-43399517 | HMEC | SE_37191 | chr1:43393285-43398371 | HSMMtube | SE_39883 | chr1:43397369-43405479 | K562 | SE_41620 | chr1:43397520-43399349 | LNCaP | SE_42796 | chr1:43396336-43399368 | Lung | SE_50202 | chr1:43396219-43406255 | Sigmoid_Colon | SE_54088 | chr1:43396020-43399837 | Spleen | SE_55340 | chr1:43396132-43399459 | Thymus | SE_55821 | chr1:43396763-43399673 | u87 | SE_57045 | chr1:43396858-43405413 | VACO_400 | SE_57417 | chr1:43397518-43398729 | VACO_503 | SE_58269 | chr1:43397518-43398137 | VACO_9m | SE_58561 | chr1:43388242-43430420 | Ly1 | SE_60624 | chr1:43388552-43428820 | DHL6 | SE_62392 | chr1:43388423-43425814 | Tonsil | SE_64094 | chr1:43397486-43398043 | HSMM | SE_64340 | chr1:43397259-43405516 | NHEK | SE_67781 | chr1:43396763-43399673 | u87 | SE_68708 | chr1:43393050-43401454 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I042929 | chr1 | 43395541 | 43414526 |
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Enhancer Sequence | TACTAAAAAT AAAAAAAAAA TTAGCTGGAC GTGGTGGCGC AAGCATGTAA TCCCAGCTAC 60 ACGGGAGGCT AAGGCAGAAT TGCTTAAACC CAGGACACGG AGTTTGCAGT GAGCCAAGAC 120 TGTGCCACTG CACTTCAGCC TGAGTGACAG AGTGAGACTC TATGTCTCAA AAAAAAAAAA 180 AAAAAAAGAG AAATACAGAA GGAAAAGGGT CTTCCCACTT GCCCCTTTTC TCCTCACCAT 240 GTCTCAAAGC CCCAGGGGCC CATCTCCTGC CATCAGGCCC TCCCCCCAAC CCCTTGCTGG 300 GGAGGAAGCA GGGCTTGACA GACAGGTTCC GCCATCCAGG AAGTACAGAC TCCCTGACCG 360 CACTGAGGGC CTGGTGTGAC AAACTCACAC ATGTCACCCT TCAGAAGTGC TTGAAAGACT 420 CACGCTGTGG CTTTCTGTTC CCCAGGCCTA GCTCCCTTGT GTCTGGCCTG CGAGCACCCC 480 CTTGAAGGAC CCACGGCCTC CTCCCCTCTC CCAAGGGCCC AGCTAGGAGG TATGGGGAAA 540 GGTTCCACAC AAGGAAGCAG TTCCAGGAAC TGGAAACGCC CGTCCTAGGG CAGCCCTGCC 600 CACCAGCCCT GCCCCCACCC TGGCCAGCTC CCACGGATGT GGTAGGCAGG CAGCACCCGT 660 TCTGCCTGAG CACACTCACC ACACTCTCAG TGCCATGGGA CTGGCCAGAC CCACCCAGCC 720 ACACGTATAG CAGAGTGCAG GCCCTAGTTA CCCAGAAACG GCTTCTTATG CACGTATACC 780 ATCACACACA CATACCCGTG CTCATAGAAT CTAAATATTC CTGCTTTAGC CAGTCACAAA 840 CTCACATGCC CCTCATCCCC TACCACTTAC AGCTCAAACT CAATTCCATG TGAACCCAAC 900 CCATCCCAAC ACCCCTCCGT GTGTGTGCAT GCCACAGGTT CATGCACACA CAGCGGTATG 960 CAGCCTCTGC AGCCTCCATC ACTGCTGTTG GTCCTCCCTA TCCCTTCCAA CCCACTGAGG 1020 TCTAGCAGAA GAAGAAGGTG TGGGCAGGCA CACTTGCCAA ACCAAAGCCT GCAGTCCCAG 1080 AAATGCCCAC CTATTCAAAT ATGCTGGGCC TGCCTCCTGG TGCCTTCCTT CCCATTGCTG 1140 TGGGTGCTCA GCCTCTAGCC ATCTTTTCCC CTGCCCTGTC ACAACCTGTC CCAAGTCAGC 1200 AGGCATCTGA TGGAGGCCAG GCTCCAAGGG GCGAGGACAG TTGGTAGGGC AGAGGCAAGC 1260 CCTAAGGATC TGCTTGTCCG TTCCAAGGAC GCCATGCAGG GCAGTGAATA GAAACCTGAA 1320 CTCTGATTCT GGACACAACT AAATTCAGGT CCTAGCTCCA CCCCTTATTT CCAGTGTGAC 1380 CATGAGCAAG TTATTTCATC TGTGAGTTTC CATGGCCCCA TTTCTAAAGT GCAGACATTA 1440 GCAGGAGCTG CTTCACAGTG CTGCAGGGAA TCAGTGAAAC AGTGCTTGGT GTCATCATCC 1500 CTAAAATCAC CCCACTGCAC ACTGGTGGCC TGAAGGCTGT GCAGACCACT AACAGAGTCT 1560 CCCCAAGCCT TCAACCCGTA ACTCAAAATC 1590
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