Tag | Content |
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EnhancerAtlas ID | HS133-01414 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:39860000-39862370 |
Target genes | Number: 13 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RARA(var.2) | MA0730.1 | chr1:39860602-39860619 | TGACCCTTCCTTGGCCT | - | 6.18 | RREB1 | MA0073.1 | chr1:39860733-39860753 | TTTTTGGGGGTGGGTGGGGA | - | 6 | ZNF263 | MA0528.1 | chr1:39860738-39860759 | GGGGGTGGGTGGGGAGGAAAG | + | 6.09 |
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| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_00753 | chr1:39855343-39861646 | Adipose_Nuclei | SE_02098 | chr1:39860180-39862099 | Aorta | SE_02863 | chr1:39860041-39862159 | Astrocytes | SE_26157 | chr1:39855144-39866292 | Duodenum_Smooth_Muscle | SE_30690 | chr1:39860149-39865801 | Fetal_Muscle | SE_37092 | chr1:39855581-39868937 | HSMMtube | SE_38617 | chr1:39856603-39862237 | HUVEC | SE_46332 | chr1:39860146-39866167 | Osteoblasts | SE_47389 | chr1:39856575-39867060 | Panc1 | SE_49419 | chr1:39860157-39861822 | Right_Atrium | SE_55086 | chr1:39859150-39865239 | Stomach_Smooth_Muscle | SE_55918 | chr1:39856681-39866226 | u87 | SE_64104 | chr1:39860136-39863063 | HSMM | SE_67929 | chr1:39856681-39866226 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I039391 | chr1 | 39856812 | 39867008 |
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Enhancer Sequence | GCCCTGGAAG AGGCTGGGGG CGGTGGCTCA CGCCTGTAAT CCCAGTACTT TGGAAGGCTG 60 AGGTGGGTGG ATCACCTGAG GTCAGGAGTT CGAGACGAGC CTGGCCAAGA TGGTGAAACC 120 CTGTATCTAC TAAAAATACA AAAATTAGCT GGGCATGGTG GCACATGCCT GTAGTCTCAG 180 CTGTTTGGGG AGGCTGAGGC AGGAGAATGG CTTGGACCTG GGAGGCAGAA GTTGCAGTGA 240 GCCGAGATCG CACCACTGCA CTCCAGCCTG GGTGTCAGAA AGAGACTCCG TCTCCAAAAA 300 AAGAAAAAGA AAAGCCCTGG AAGACAGGGC CCAGCATGGA GTTGAAAGAC TGCCAGTTTA 360 CTCCTTCCTT TCAAATGATT ACAAGGACAG TATCAGCTCA TGTACGTTTT TGGCAGTTAG 420 TACACCTGCC TGAGAGTGAG TCACTGGAGG ATAGAGCAAA TGAGGTTAGC GTTATCTACC 480 TGCCCTTGGA GAGACAGGAA ATCACACTTG GTATGACCTG TCTGTCACCT GGAGGTTTAG 540 GTTTCCCCAG CTTTACCAAG ATGAGTGGGT ATCCTCTATC CCTGCCAACC CCCACCTTGT 600 GCTGACCCTT CCTTGGCCTG TCTTGGTTTT TTCCTTTCTT CCTTAAACAA AGCTACTCCA 660 AATAGGAACT AGGGTCCAAG GAAATAAAGA CAGTATCCTA AAATGGATTT CTCAATTTCG 720 GCACTATTGA CATTTTTTGG GGGTGGGTGG GGAGGAAAGG GGCAGCCACT CACGCCACCA 780 CCTCTGCCTG CCACTATCAA CATTTTGGAC TGGATAATTC TTTGTTGTGA GAAGCTGTCC 840 TGTGCATTGT AGGCTGTTTA GCAGCATTTC TGACCTAGTA ACTTCCCAGT TGTACAACTA 900 AAAATGTCTC CCTGGAAGGC AGAATTACCC TCTGTTGAGA ACTATAGCCC TGGAAGAAAT 960 TGCCACCTAT ACATGGGAAA CTTAGAATTC AGGTGGAATA GGTTACTAGT TAAATATTTA 1020 TGTAACAAGC AGCCTTCTGA TAATCTGATT ATGACTGTGT GTAGTGGCAA CAACCACTTC 1080 TAAGTCAGCT TTCCTTTAAG CCAGGCTCTG GATTCTTTAT TTTTGCTGGC CTTAATCTGT 1140 GTCTGGCTTA ACACCTCCTG GTCACTTTCC CTGGCTGGAA TTTACGTACA GTTGTCAGTT 1200 GTTGATGCAG GTGTTTGGTT GATGATGCAT TGCCAAAGAG AAGAGGAACT TCCTTTGTGG 1260 ACATACTTCA GGGAGCTTCC TTGTTCTGTG CCTTTAAGGG GAGACTACAG TCTCTCAGTT 1320 GTTCTCCACA GCCAACCAAG AGTTTGGCTG CTGATATTTA TAACCCTTAT GTGACCACCC 1380 CCACCTCCCC ACCCCACAAA GAATTCCAAT GCTCTGTAAT AATCCTCTCC ACCCCCACCA 1440 TAGCAACTGG ATGTGGAGAA GGTGAAGGAG CCTTTAAGGC CTTTAAGTTT GCTTCATGTT 1500 GAACCTTTTC CAGCTCCCTT TTAAAATATT GCCAGTTGTA TTTTAAATAT CAGTGTCACA 1560 AGCAAAATCC CAGGCTTGCA GCCACTGCAT CATCTTAAAG GAGCCTCATG CCCCAGTGAA 1620 GGTAGTAAAA TTGAATGGAA GGTAGTAAAA TCATCAAGAA AGGATTGATA GATTTTACAA 1680 AAATCTGTCT GGAAATTTGA TAGCAAGGTG AGATTTTAAA GCAACAAACA GGCTAGGCGC 1740 AGTGGCTCAT GCCTGTAATC CCAGCATTTT GGGAGGCTGA GGCAGGTGGA TCACGCTGTC 1800 AGGAGATCGA GACCATTCTG GCCAACATGG TGAAACCCCA TCTTAGCCGG GCATGGTGGC 1860 ATGCGCCTGT AGTCCCAGCT ACACAGGAGG CTGAGGCAGG AGAATCGCTT GAACCCAGGA 1920 GGTGGAGGTT GCAGTGAGCC GACATCGCGC CACTGCACTC CAACCTGGGT GACAGAGCGA 1980 GACTCCATCT CAAAAAAAAA AAAAAAAGCA ACAAACAAAT ATATCTGTAA CCAAAGAAAA 2040 GGACTGAGCA GTTGGATTTG AGTTTACTAA AATTCTTCAC ATACAGTATC AGTATGTAGC 2100 ATTCACAACT AAGATTTATC ATTTGTATAA GAAGGAAGAA ATATATTTCC AGAAAAACTA 2160 GAATGTATCC TGTGCAGAAC TTGTATGTAT TGATCGTTTA GTAGTTGATT AGTAAACATG 2220 GTTAAGATAA GCACAGACTT GCAGAAAAGG ACTGATCCTC ACTGTGCCTA GAAATGAATG 2280 GTAAATGGTC TCAGCCTTAG GCTGGTTCTG GAGCTTCAGA AAAATATCCT GGGCACTTTC 2340 AAGCTCGCTA ATAAGCTATG AGCTTCTAGG 2370
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