EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-00989

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:29185820-29188370

Target genes

Number: 22
Name	Ensembl ID

DNAJC8	ENSG00000126698
ATPIF1	ENSG00000130770
SESN2	ENSG00000130766
MED18	ENSG00000130772
PHACTR4	ENSG00000204138
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
TRNAU1AP	ENSG00000180098
SNHG12	ENSG00000197989
RAB42	ENSG00000188060
TAF12	ENSG00000120656
GMEB1	ENSG00000162419
YTHDF2	ENSG00000198492
OPRD1	ENSG00000116329
RP1	ENSG00000226852
EPB41	ENSG00000159023
TMEM200B	ENSG00000253304
SRSF4	ENSG00000116350
MECR	ENSG00000116353
PTPRU	ENSG00000060656

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LHX2	MA0700.1	chr1:29186989-29186999	ACTAATTAAC	+	6.02
Rxra	MA0512.2	chr1:29187345-29187359	TTACCTTTGACCCT	-	6.07
Znf423	MA0116.1	chr1:29187242-29187257	GCAACCTAGGGTTCC	-	6.23
Znf423	MA0116.1	chr1:29187242-29187257	GCAACCTAGGGTTCC	+	6.49

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I028859

chr1

29186326

29187977

Enhancer Sequence

TGAGTGAGTG CACCATGGCA CAGGCCACTG ACCACAGGAG GCAGTACATG GGCCTTTGTG 60
GGCTTGCAGG GCACTTACCA GGGTGAGTGT AGGTGGCTCA TCAGCAGAGG TTGGATTCTG 120
ATCAAGATCA ATGATGGTGT GGTGGCTGGC CAGTGGGAGT GTAGAAGAAG GTCAACCAAT 180
GGGAATGGGA ATAGCTGGCC AGGGGGGCAT GCGGATGGTT GACTATTGTG AAGATGAATG 240
ACTGATCAGT GGTCATATGG GTTGCTGGCC AAAGGGAATG TATGAATTTA TGAAGGAGAT 300
TATGGATGGC TGGTTATGTA CATGTAGGTG GCTGGCCAGG GATGTGTGGA TGTATAGAGA 360
GATGGTTGGA TGTCCAGTGA GGTGAGGGTG TCACTGACCA GTGAGCAGTG GAGGCTGCAA 420
GATCTGTGGT CCCATTTTAA ACTCCCTTTC ATCCTAATTT GAAAACCACT GGCCTGGATG 480
ACCAAAGCAA AGCCTAGAGA ATAGCCTGCA GGGAATGACA AATAGGAGCT AAAATGGTAA 540
TTATAGTAAC TGCCTGTATC AGGGGAGCTG CAATAACATT CTCCAAAGCT CAGGGGCTTA 600
ACACTGTAGA GGTTTCTCTC TCACTCCCAT CACAATCCAG TGTGAGTAGG AGGAGCACAG 660
ACATTCAGGG ACCCAGCCTC CTGTTGATGG TTTCTGAATC TTCTACTGCT GGCATCTGGC 720
CGGCAGATGA ATATGGAGAG GGAGCGAGGA GAAAGCACAG CCACTTTAAA TGTTGGTTGG 780
GTGCAGTGGC TCATGCCTGT AATCCCAGCA TTTTGGGAGG CCAAGGCGGG TGAATCACTT 840
GAGGTCAGGA GTTCCAGACC AGCCTGGCCA ACACGGTGAA ACCCTATCTT TACTAAAAGT 900
ACAAAAATTA GCCAGGCGTG GTGGTGGGCG TCTGTAGTCC CAGCTACTTG GGAGGCTGAG 960
GCAGGAGAAT CACTTGAACC TGGGAGGCGG AAGTTGCAGT GAGCTGAGAT CATGCCACTG 1020
CACTCCAGCT TGGGCGACAG AATGGGACTT GTCTAAAAAA AAAAAAAAAA ATTTATGGCC 1080
CATTTCTTCT AGTGACAGCT GGTCACATGG CCCCACCTTA ATGCAAGGAA GTGAGAAATA 1140
TTGTTTAGAA GGGCTCCACA GACATAGTAA CTAATTAACC TCTCTGAGTC ACACTATATC 1200
ATGAGATGTT GAGAAGGTTA AAAGAGATAA TATGTGTAGA ATACTTAGGA CAAGTCCTGG 1260
CTCATCGCCA AGGCCCAATG AATAATAGCT ATTAAATGAT TAAGCCTGTG AGATAGACAA 1320
GGCAGGGACT CCTACCTCCA TTTGACTGTA GGGAAACAGA ATCAGAGAGG TCAGGTGGTT 1380
TACTTAGGGT CACACAGCCA GGCATTTTGT GGAATTTGGC CTGCAACCTA GGGTTCCTGC 1440
CCCCAGGTCT GTTACTCCTT CTAGTCCCTT TTGTGGAAGT TTGCAGAGGG TTGATGCTGT 1500
GGGTGGGAGA GAACAAGCTT CTTGGTTACC TTTGACCCTC ACAAGGGCAG AGTCCCTGGT 1560
GCCCTTTTAT AGCCTGTGAG CCATTGGCCT TGACTCACAG CAGAGCCCCA TTCCTCACTG 1620
TCAGCCTTCA GCTTACGGGC CATTAACTGC ATCCCTCCTG GGGCTGGACC AGATGGGCCT 1680
CCTCACTCCA CAATCCCTCA CACACACACT TTCCCAGTGT GTGCCATCAG CACTTATTGA 1740
ACCTGTGGGC CACTTGCTGT GTGACCTTAA ACAAGTGCTG TTCTGGTTCC TATACAATGA 1800
AGGTCTTGGA TTCAGTTACT TCTAGGGGTC CTGCCAGCCT GATGTCCTGT GGACCCACTC 1860
TGTCTGTGGA TCCCCAGCCC CTTCTCACTT CTTAGCCTCA AGTCCATCGT GTGGCTTCTT 1920
AAATCCTAGC ATTCCAAGAG ATCCTGGGAG TCCCCTGGGC CAGCCTCAAG GCTGTATCAG 1980
AATCCCACAA CACCCCCTAA GGTGTTCATC CAGCCCAAGC CCACACTCCA GGAATGGGGA 2040
GCTCATTTCA TCCTAGGCAC CCTTCCTATC TCAAGAAGGA AGTCCTTGAG TTAAGCTGAA 2100
GTCTGCTTTC CTCCCAGAAG GAAGGAAGTT TTGTTTTGTT TTTGTTGTTG TTTTGAGACA 2160
GGGTCTCGCT CTGTCACCCA GGCTGGAGTG CAGCGGCACT ATCCCAGCTT ACTGCAGCCT 2220
CAACCTCCAG GGCTTAAGCG ATCCTCCCAC CTCAGCCCCC CAAGTAGCTG GGACTGCAGA 2280
TATGCACCAC CATACCCAGC TAATGTTTGT TTTTTTTGTA GAGATGGGGT TTTGCCATGT 2340
TGCCCAGGCT GGTCTCCAGC TCCTGGACTC AAGCAGTCCA CCTGCCTCAG CCTCCCAAAG 2400
TGCTGGGATT ACAGGCATGA GCCCCATGCC TGGCCAGGAG GTTCTTGTGA TTAAGCTGAG 2460
ACCTGCTTCC CTCTAGGGAG CCTGACCCTA TCCTTGAGTC CTGGACTCCC CCACATATAT 2520
GCCCCTCTTT CCCTGTGGGT ACGCCAAGAG 2550