| Tag | Content |
|---|
EnhancerAtlas ID | HS133-00930 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:27960310-27961270 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NFKB1 | MA0105.4 | chr1:27961230-27961243 | TGGGGATTCCCCT | + | 6.67 | | NFKB1 | MA0105.4 | chr1:27961230-27961243 | TGGGGATTCCCCT | - | 6.87 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_09188 | chr1:27949083-27965280 | CD14 | | SE_11718 | chr1:27954254-27965771 | CD20 | | SE_20210 | chr1:27956842-27962781 | CD56 | | SE_25377 | chr1:27949159-27962785 | DND41 | | SE_39434 | chr1:27958839-27960845 | Jurkat | | SE_39434 | chr1:27960904-27961631 | Jurkat | | SE_41048 | chr1:27956841-27962537 | Left_Ventricle | | SE_42462 | chr1:27956689-27962591 | Lung | | SE_49213 | chr1:27958866-27961763 | Right_Atrium | | SE_53817 | chr1:27954371-27962630 | Spleen | | SE_55520 | chr1:27958871-27961519 | Thymus | | SE_62470 | chr1:27916580-27996594 | Tonsil | | SE_66376 | chr1:27958839-27960845 | Jurkat | | SE_66376 | chr1:27960904-27961631 | Jurkat |
|
Enhancer Sequence | GTGAAGGGGA GGCTCGCTGA GTCAGGGATA GCCCTTAACC CTTCAGGACA CTCAGCAAAA 60
ACTGCTTTCT GCACCTGATT CTCGTGGGGG AAGAGTGGAC ACAAGGATCA TTTCTCACCA 120
TAGTTCAGAT GAGGAAAGTG AGGCCCAGAG AAGCCCTGTA ACTTGCCCAC AGTCACACAG 180
CAATTAAGGG CCCAGTCTTG CTAAGAACCC AGGTCTCTCA AACAGCAGAT CCTCCACCCC 240
AGGATCCCTG AACACAGCGG CATCGCCTCC TACCTCGGTC GGGAAGCCCA CCCCCCACCC 300
ACCAGACCGA GGATTCCAAA AGGGGGCGAA GGCGGAGAGC AAAGGGGGCT GCGCCCACCC 360
GGAGCCCCGC GGCGGCCCAG CGCGGCCCGC CCTCTCGTTG CCTTGGAGGC AGCCCCTGCG 420
GGCACTCGCG GTCAAAGGCA GGATTTCCGT CGGGGCGGCA GCAATTCCCG GATCCAGCGG 480
GGAGCGCGGG CCGAGACCGC CGCGGGCGCG GAGGGGGCGC CCGGAGAGGC CTGTCCCTGC 540
CGAGGGCGGG GACTTCCCCA GGAAGCGGGG ACCCACGCCT CGCGCGCCCG GCAGGAGTCC 600
CCTGCAGCCC GGAACCTACC GCAAGGGCGG GCCGAGAGGG TCGCGGGGCC GCGGTCGCGG 660
CCGCTAACGT TACCCTGCGG GCTGTGGGCT TCACCCCGAC TTCGGCCGGC TCGGAAGAGG 720
GGAACTTCCT GGACCCGCAA TTGCACCCCA GGTTCTCCGT CCTCCAGAAG TCGTTCTCCT 780
CAACCCCCTT CCCGCCAGCT CCCTCTCCTG TTCCCTCCAG CACCCCCACC CATTTCCCCT 840
CTCCTGGACC CATCAGACCC GTCGGCTTCT CCCCAAAGTC CCACTCTCAC GATCCCTTCA 900
GTTTCTCCCC CAGACCGTCC TGGGGATTCC CCTTAATCCT TCTCCCCCAC CTCAGCCCCC 960
|
