EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-00730

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:25501120-25502820

Target genes

Number: 27
Name	Ensembl ID

IL28RA	ENSG00000185436
NIPAL3	ENSG00000001461
C1orf201	ENSG00000001460
SRRM1	ENSG00000133226
CLIC4	ENSG00000169504
SYF2	ENSG00000117614
RP3	ENSG00000261349
RHD	ENSG00000187010
SDHDP6	ENSG00000224183
RP11	ENSG00000259984
TMEM50A	ENSG00000183726
C1orf63	ENSG00000117616
SDHDP1	ENSG00000238084
RHCE	ENSG00000188672
TMEM57	ENSG00000204178
LDLRAP1	ENSG00000157978
MAN1C1	ENSG00000117643
SEPN1	ENSG00000162430
RP1	ENSG00000255054
FAM54B	ENSG00000117640
AL020996.1	ENSG00000223474
C1orf135	ENSG00000127423
PAQR7	ENSG00000182749
PAFAH2	ENSG00000158006
EXTL1	ENSG00000158008
PDIK1L	ENSG00000175087
ZNF593	ENSG00000142684

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GFI1	MA0038.2	chr1:25501418-25501430	TGCTGTGATTTA	-	6.27
Gfi1b	MA0483.1	chr1:25501418-25501429	TGCTGTGATTT	-	6.62
TP63	MA0525.2	chr1:25502071-25502089	AACATGATGGCACATGTC	+	6.14

Enhancer Sequence

ATAAAAACAA ACTCTGCCAT ACTCTGAACT CTGTAATCAA AGAGGTAATT TAATAAAACG 60
AGTATCCCTG TTTTCGGGTG GACCCACTTA ACTGAAACCC AAAGCCAGCC CTGGAGTAAA 120
TTGGGCTGTG GACGAATCGA TTAGGCCCAT CCACACTTTC TCATTTTCTA TAGAGTCAGG 180
GCTTAACCAG GTTAATTTTT GTTAAACACA TTACCCAGGT ACTCTCCTCT TACCAGCCCA 240
GTGATTTTGT GTCGGGCCTG AAGGATTGTA ATTGCAATCC AGCAAGACGC CAACTGAGTG 300
CTGTGATTTA CTGAGGGCCA CAGAGCACAG GCCGCCTCCT ACCTGCCAGC TGCTGGATGG 360
TAACTTTCTT CCTTGAATCT TGGCATGGCT AATGGATGAG GGTCCAGAGC AAGGCGCCAT 420
GCGAGAGTTC TTCCCCAGGG AGAACAGGCT GCTGCCTCTT TTGGGCACCC AACTCTGTGG 480
TTCTCTCTAG GCTTATGAGG GAGAACAAAG GCCTCTTTGT TCCATGGAAC AGAAACTCAG 540
GAGGGCCTGG GCTCCCGGGC ACTGGCCTTG GGAATTGCTG GTCATTCCCA GTCATGCCCG 600
TTCACTGGGA AGTATGACCT TCCTAACTGT TGTCCAGGGA ACATTTCCTG GCCTCATTTT 660
CCCATCTCCT CCAGGCCCCA GACCTCAGAC TTCTCCGAGA CAGGCCCAGT GCCTCTCTGC 720
TCCACTTCAG ATGCACCTTC TGCTGCACTC TGCTCTCGTT GGGCCTGATG CGCACACACT 780
CAGCTTTTCA TCCTGCTTTG CAGACACCTC ACATCTCCAC ACCCCAGTCC CCTTGTCTGC 840
TGAATGGGCG TATGAGGGCA CCTTCTCATA GGACTGTGAG GACAAAGCCT GAGGAACAGC 900
TACCTGTGCC TGACACACAG TAAGTCTTCA ACAAGTGTCA ACTGTATAGC CAACATGATG 960
GCACATGTCT GTGGTCCCCA CTACTTGGGA GGCTGAGGTA GGAGGATCGC TTGAGCTGGG 1020
GAGGTAGAGG CTGCAGTGAG CTGTGATCAT GCCCACTGCA CTCCAGCCTG GGTGACAAAG 1080
TGAGACCCCG TCTCAAAAAA AAAATAAAAA TAAAAAATAA AACAAAATCA CCTGTAGTCA 1140
TTTACCTTAA GAAGAGAAAC TGGCAAGGAC AGAGAAGAAC CAATGCTAGC GAGGATGGGG 1200
AGAAACGGAG ACCCTTATAT GATGCTGGCA TGCTGGCAGG GATGTAAGGA TGGGGCAGAC 1260
ACTTTGGAAA CAGTTTGGCA GTTTCCTAAA AAGTTAAATA TGCATCTGCC ATACGACCCA 1320
GCAATTTCAC TCCTATGTAT TTACCCAAGA GAAATGAAAG CATGTGCCCA CACAAAGACT 1380
TGTACACGAA TGTTCCTAGC TGTTTTATCT TAATACTTGA AAACTAGAAA CAACCCAGAT 1440
GGCTGTGGGC AGGTGAATGG ATAAAGTATG GCATGTCCAT GCAATGGAAT ATTAGGTAGC 1500
AATAAAAAAA GAATGAAACA CTGAGACCTG CTACAATGTG GATGAATCTC AAACCATTAT 1560
GCTAAGTGAA AGAAGGCAGA CACAAAAAGC CATGATTCCA AAACAAAAAA TACATGATTC 1620
CATGTATATG AAATGTCCAG AACAGGCAAA TCTATAGAGT TAGAATGTAG ATCTGTGGTT 1680
ACCTTGGGCT GAGAATTGAA 1700