EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-00665

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:24123640-24124180

Target genes

Number: 14
Name	Ensembl ID

HNRNPR	ENSG00000125944
ASAP3	ENSG00000088280
E2F2	ENSG00000007968
RPL11	ENSG00000142676
TCEB3	ENSG00000011007
RP5	ENSG00000236810
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009
GALE	ENSG00000117308
HMGCL	ENSG00000117305
FUCA1	ENSG00000179163
RP11	ENSG00000229106
PNRC2	ENSG00000189266
SRSF10	ENSG00000188529

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)

MA0728.1

chr1:24123928-24123943

TGAACTCCTGACCTC

6.22

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_23543	chr1:24122102-24123929	Colon_Crypt_1
SE_23543	chr1:24123947-24128389	Colon_Crypt_1
SE_25323	chr1:24122216-24123843	Colon_Crypt_3
SE_31820	chr1:24116054-24129044	Gastric

Enhancer Sequence

TGGGATGTGG GTCAGGTGGT GAGGCCAGAG GCACAGGCAG CGTGTCCCAG CTGAACCCAG 60
AGCCCTCCTC ATGCCTATTC TGTTTTTTTG AGATGGAGTC TCACTATGGC CCAGGCTGGA 120
GTGTAGTGGC CTGATTTGGC TCACTTCAAC CTCTGCCTTC CAGGTTCAAG CAATTCTTGT 180
GCCTCAGCCT CCCGAATAGC TGGGACCACA GGCACACACC ACCATGGCCG GCTAATGTTT 240
GTATTTTTAG TAGAGATGGG GGTTTTACCA TGTTGTCCAG GCTGGTCTTG AACTCCTGAC 300
CTCAGGTGAT CTGCCCACCT GGGCCTCCCA AAGTGCTGAG ATTACAGGTA TGAGCCACTG 360
CGCCCGGCCA GTTGTCTATT TATTATCTTT AGAAACAAGC AGGGGATGGG GCCCTCCACT 420
GCAACTGCCT GAGCCTTAGC TTCCTCCTTA GTGGGGGTGT TCGGAATCCC ACCCCTGGGC 480
TCAGGGTGGG CCCTGAGGAG TCCATCGATC AGTGGAGCCA GGGCACTGTC AAGGGGGCCC 540