| Tag | Content |
|---|
EnhancerAtlas ID | HS133-00502 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:17914140-17914940 |
Target genes | | Number: 11 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Znf423 | MA0116.1 | chr1:17914511-17914526 | GCAACCCTGGGGGGC | + | 6.32 | | Znf423 | MA0116.1 | chr1:17914511-17914526 | GCAACCCTGGGGGGC | - | 7.52 |
|
| | Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
| SE_01537 | chr1:17911582-17917850 | Aorta | | SE_06186 | chr1:17911555-17916611 | Brain_Hippocampus_Middle | | SE_23081 | chr1:17911591-17917242 | Colon_Crypt_1 | | SE_23747 | chr1:17913016-17917052 | Colon_Crypt_2 | | SE_24767 | chr1:17913063-17917859 | Colon_Crypt_3 | | SE_26139 | chr1:17913672-17916429 | Duodenum_Smooth_Muscle | | SE_26573 | chr1:17912212-17915422 | Esophagus | | SE_28131 | chr1:17912190-17916922 | Fetal_Intestine | | SE_29073 | chr1:17912148-17916967 | Fetal_Intestine_Large | | SE_31687 | chr1:17913629-17915521 | Gastric | | SE_34117 | chr1:17913757-17915593 | HCC1954 | | SE_40808 | chr1:17912326-17917411 | Left_Ventricle | | SE_47562 | chr1:17912926-17915409 | Pancreas | | SE_49224 | chr1:17913592-17916175 | Right_Atrium | | SE_50079 | chr1:17911557-17917163 | Sigmoid_Colon | | SE_52601 | chr1:17912623-17916429 | Small_Intestine | | SE_57000 | chr1:17914085-17916055 | VACO_400 | | SE_65277 | chr1:17912613-17917151 | Pancreatic_islets | | SE_68684 | chr1:17912515-17917251 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I017586 | chr1 | 17912277 | 17916889 |
|
Enhancer Sequence | GTAAGATGTT TCTGGGAACT TCCGGTCCTG GGGCTACAGG GAGCATGGAG AACTGGGCGG 60
AAGCTCCAGG CTCTCAGGGA TGCCTGGTGG CCCCTCCGCT GTCCCCAGAA AGCAGGAAGG 120
GAAAAGCCAG TGGGAAGAAG CTGCAGTCTG TGGCTTCCCT GGTGAATTGG AAATTCCTAG 180
CATTCCTGCA ACATCTGGCG CACTTTGGCA CATTGTAAAT GGAAGTGGTT GGCCTGAGTT 240
TTGCTTTGGA GACAGTTGCT GCCCAGAGCT TGTGTCTCTG AAGTCCTCCC TGCAGCTTCT 300
CCTAAAGAAT CCACACCAGC CAGAAGAGCA GCCTCCCAGA GGTTCCCTCT CCTGTCTGCC 360
TTGGGGAGCT GGCAACCCTG GGGGGCAGGA GGGCCCTGAT AAGCTGGTGT TAAATGGCAG 420
CTTCTGGGCT CTTAGAGTCT GTTATCTGAG AGAGAGAATC TGGGGACTGG ACCAGCTGGA 480
ACTTCCTGCA GGCTTGGGGA CAGCGGGCTC CTGGAGCAGC TGGGGGTGGA GGGCAGGCCC 540
AGAGCAGGCA GGGTGGCTGC CACGGGTTCT GGCTGGAGTT GGGAAGTGGG CCACGGGGTG 600
GGTGGGGGTG GTGCAGGCCA GGTAGGGGAG CTGATGACTG AGCCAGGGCT GGGGGAGGGA 660
GGCGGGGCTC AGCAGGCACC CAGACTGGCC AGGCCCTGTC TGCGGCGCCC CTGGGGAGGC 720
TGGGAAAGGG GCGGGGAAGG CCTGAGTGCC TGGGGCCAGC CTCTGGCCTG ACAGGCTCTC 780
TGTCTGCTCT TCTTTTGCAG 800
|
