EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-00005

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:874510-874650

Target genes

Number: 34
Name	Ensembl ID

RP4	ENSG00000236679
AL669831.1	ENSG00000197049
NOC2L	ENSG00000188976
RP5	ENSG00000240409
MTND1P23	ENSG00000225972
MTND2P28	ENSG00000225630
SAMD11	ENSG00000187634
PLEKHN1	ENSG00000187583
C1orf170	ENSG00000187642
RP11	ENSG00000242590
HES4	ENSG00000188290
ISG15	ENSG00000187608
AGRN	ENSG00000188157
KLHL17	ENSG00000187961
FAM87B	ENSG00000177757
LINC00115	ENSG00000225880
C1orf159	ENSG00000131591
SDF4	ENSG00000078808
B3GALT6	ENSG00000176022
UBE2J2	ENSG00000160087
SCNN1D	ENSG00000162572
PUSL1	ENSG00000169972
ACAP3	ENSG00000131584
CPSF3L	ENSG00000127054
GLTPD1	ENSG00000224051
TAS1R3	ENSG00000169962
DVL1	ENSG00000107404
MXRA8	ENSG00000162576
AURKAIP1	ENSG00000175756
MRPL20	ENSG00000242485
VWA1	ENSG00000179403
ATAD3A	ENSG00000197785
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr1:874590-874608	TCTAGAGGGGCGTGGTCC	-	6.02
KLF14	MA0740.1	chr1:874593-874607	AGAGGGGCGTGGTC	-	6.36
Klf12	MA0742.1	chr1:874592-874607	TAGAGGGGCGTGGTC	-	6.42

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_68417	chr1:838905-881008	TC71
SE_68418	chr1:838905-881008	TC71

Enhancer Sequence

TAAGAGCGTG GCTGGGACGA GAGACAGGTC ACCAGGGGAG GGGGCAGTCC CTGAGGGTCC 60
CCTGGACCTC GAGCAGGCAC TCTAGAGGGG CGTGGTCCTC GGCAGTGCCT GGAGAAACCT 120
CTCACCCCGG GTCCTCCCCA 140