EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS131-00403

Organism

Homo sapiens

Tissue/cell

ME-1

Coordinate

chr1:78443790-78444560

Target genes

Number: 6
Name	Ensembl ID

USP33	ENSG00000077254
RP4	ENSG00000232672
FAM73A	ENSG00000180488
FUBP1	ENSG00000162613
DNAJB4	ENSG00000162616
GIPC2	ENSG00000137960

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_13760	chr1:78442270-78446554	CD34_Primary_RO01536
SE_14888	chr1:78440854-78446748	CD4_Memory_Primary_7pool
SE_18555	chr1:78439946-78447087	CD4p_CD25-_Il17-_PMAstim_Th
SE_19704	chr1:78440503-78446337	CD4p_CD25-_Il17p_PMAstim_Th17
SE_21141	chr1:78441202-78446868	CD8_Memory_7pool
SE_21684	chr1:78442308-78446105	CD8_Naive_7pool
SE_22645	chr1:78440827-78446362	CD8_primiary
SE_35273	chr1:78442114-78446661	HeLa
SE_36446	chr1:78442383-78446764	HMEC

Enhancer Sequence

TAAGAATGTA AAGTTCAAAT TAAGGTATCT TTTATTTTCC TGGAATACAC GCACTATTTT 60
AACAGCTTTC GTCTGGGAAA GTGGTGCCTT CAGGGCAAAT GCACGCACTA CGTAATACAA 120
AGAGGTCTGG TCAGTTTACG ACTCTGAACT GAGAGGCAGA TTCAAATTGA AACCTCTGGT 180
ATAATGGGCC TGAGGCCATT TTGAGAAATA AGGGGGGCGG ACTGGTGGAA CAGACTGACA 240
CGTAAATCCC GCCCAGAAAA AGGCTGCTTT CAAGTCCCTT CCTTGTAGAG GTGTGACGGT 300
GAATGGTACT GAAAGCGGTT TTAATTGCGA GAGAGAACGG AAATGAGCTG TAAAGGCTAC 360
TTTAATGATA AATCCCTTCC CTTGCTATGG CTCCAGGACA GACCCTAGTT CTTTCCCAAA 420
CTCATTACCA GAACCTTCCA TTAAATTGTG TGAAACTAAC TGCGCTTTAT CCCCTGGAAG 480
AGGATCTTTA TCTAAACTAG CTCACTGGAG ACACGCGAGT GCCGCAGAAG CGGGAGAAAG 540
ACTTCAGGCC TTCTTTGCGT AGCACGCGTC GGGGTTCTAA GTGGATTAGG CACCAAGAAC 600
ACAAAACTGG GTTCTGGTCT CTAATCGTTA TTACCAACAT GGGGAAACGT GTCTCTTCAC 660
ATTTCAGCCC GGAAGAACAC CTCTTTCCTC TTCCTCATGC GCTTAAGGGT AGCGGCCTAC 720
TCAGTCAGCG GCCAATTACC GTGAGCTTTC GGGATTCCGC CGCGCGGTCC 770