EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS131-00218

Organism

Homo sapiens

Tissue/cell

ME-1

Coordinate

chr1:29064190-29064450

Target genes

Number: 20
Name	Ensembl ID

MED18	ENSG00000130772
Y	ENSG00000206779
RP1	ENSG00000229820
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
PRDX3P2	ENSG00000231468
TRNAU1AP	ENSG00000180098
SNORD99	ENSG00000221539
SNORA61	ENSG00000207311
SNORA44	ENSG00000207314
SNORA16A	ENSG00000207070
SNHG12	ENSG00000197989
RAB42	ENSG00000188060
TAF12	ENSG00000120656
RP11	ENSG00000229388
GMEB1	ENSG00000162419
YTHDF2	ENSG00000198492
OPRD1	ENSG00000116329

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:29064395-29064415	AGGGTGGGGGTGGATTGGGT	-	6.93
SP1	MA0079.4	chr1:29064245-29064260	TGGGGGCGGGGTCTC	-	6.16
SP4	MA0685.1	chr1:29064243-29064260	GGTGGGGGCGGGGTCTC	-	6.07

Enhancer Sequence

AAAGGTAAGT CCCGCTCCGC CGGTGGCCCT GAGCCGGGAG GGGGACGCGG GGCGGTGGGG 60
GCGGGGTCTC CGGGAAGCGC CCCGGGCGGA GGACCTTTCG GAAGCCGCTT AGTTCGCAGG 120
TGCCGCACAC TTAAGTATTT TGACCCTTTC GGTGTGTTCT TGCAGCTGGC GAACAGCTTT 180
TTCGCTAACA AGGAGTAATT CATTAAGGGT GGGGGTGGAT TGGGTTTTGA AACGCTCCAG 240
GTCCTTAGTT TCCTGTAGGT 260